Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 5.3e-45 184.1 101 100.0
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 5.3e-45 184.1 101 100.0
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 7.6e-44 180.3 99 98.0
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 1.3e-40 169.5 99 91.9
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 1.6e-38 162.5 92 93.5
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 6.3e-38 160.6 99 89.9
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 1.8e-37 159.1 99 88.9
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 1.5e-36 156.0 98 88.8
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 7.9e-33 143.7 93 81.7
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 1.8e-32 142.5 93 80.6
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 1.8e-32 142.5 93 80.6
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 1.8e-32 142.5 94 81.9
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 3.0e-32 141.7 93 81.7
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 5.1e-32 141.0 93 79.6
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 1.1e-31 139.8 93 81.7
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 4.3e-31 137.9 93 77.4
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 5.7e-31 137.5 90 82.2
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 7.4e-31 137.1 94 77.7
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 7.4e-31 137.1 94 74.5
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 1.3e-30 136.3 94 76.6
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 1.6e-30 136.0 86 82.6
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 2.2e-30 135.6 97 75.3
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 3.7e-30 134.8 97 77.3
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 4.8e-30 134.4 89 79.8
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 4.8e-30 134.4 100 75.0
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 4.8e-30 134.4 94 76.6
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 4.8e-30 134.4 94 76.6
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.3e-30 134.0 92 76.1
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.3e-30 134.0 92 76.1
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 6.3e-30 134.0 90 81.1
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 1.4e-29 132.9 93 77.4
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.8e-29 132.5 90 80.0
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 1.8e-29 132.5 89 78.7
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.4e-29 132.1 85 80.0
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 2.4e-29 132.1 93 76.3
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 3.1e-29 131.7 94 78.7
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 6.9e-29 130.6 95 72.6
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 6.9e-29 130.6 92 79.3
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 9.0e-29 130.2 97 72.2
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 1.2e-28 129.8 98 68.4
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 1.2e-28 129.8 97 74.2
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 1.2e-28 129.8 88 76.1
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 1.2e-28 129.8 94 73.4
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 1.5e-28 129.4 88 73.9
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 1.5e-28 129.4 95 73.7
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 1.5e-28 129.4 97 74.2
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 3.4e-28 128.3 89 78.7
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 4.5e-28 127.9 89 75.3
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 4.5e-28 127.9 83 78.3
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 5.9e-28 127.5 97 71.1
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 1.3e-27 126.3 85 74.1
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 1.3e-27 126.3 85 74.1
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 1.3e-27 126.3 91 72.5
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 2.2e-27 125.6 89 73.0
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 2.2e-27 125.6 93 73.1
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 2.9e-27 125.2 85 77.6
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 5.0e-27 124.4 89 73.0
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 6.5e-27 124.0 82 78.0
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 8.5e-27 123.6 89 73.0
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 1.4e-26 122.9 89 71.9
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 1.4e-26 122.9 89 71.9
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 1.9e-26 122.5 93 73.1
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 1.9e-26 122.5 92 71.7
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 2.5e-26 122.1 89 71.9
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 2.5e-26 122.1 86 74.4
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 2.5e-26 122.1 97 68.0
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 3.2e-26 121.7 86 73.3
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 3.2e-26 121.7 86 73.3
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 3.2e-26 121.7 94 70.2
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 4.2e-26 121.3 92 69.6
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 4.2e-26 121.3 86 74.4
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 5.5e-26 120.9 79 75.9
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 7.2e-26 120.6 86 72.1
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 7.2e-26 120.6 90 66.7
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 7.2e-26 120.6 90 66.7
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 9.4e-26 120.2 93 72.0
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 1.2e-25 119.8 89 71.9
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 1.6e-25 119.4 94 69.1
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 1.6e-25 119.4 83 74.7
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 2.1e-25 119.0 79 74.7
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 2.1e-25 119.0 97 69.1
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 3.6e-25 118.2 97 68.0
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 4.6e-25 117.9 82 75.6
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 6.1e-25 117.5 93 69.9
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 1.0e-24 116.7 93 69.9
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 1.4e-24 116.3 88 69.3
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.8e-24 115.9 77 77.9
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 1.8e-24 115.9 79 75.9
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 1.8e-24 115.9 81 72.8
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 6.7e-24 114.0 87 69.0
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 6.7e-24 114.0 82 68.3
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 1.1e-23 113.2 93 68.8
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 2.5e-23 112.1 92 67.4
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 7.4e-23 110.5 77 71.4
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 6.3e-22 107.5 85 67.1
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 8.2e-22 107.1 92 64.1
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 3.1e-21 105.1 85 63.5
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 5.3e-21 104.4 72 73.6
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 1.5e-20 102.8 69 81.2
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 2.0e-20 102.4 87 59.8
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 1.0e-19 100.1 73 74.0
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 2.9e-19 98.6 68 77.9
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 4.2e-18 94.7 80 61.2
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 5.5e-18 94.4 66 72.7
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 7.2e-18 94.0 85 62.4
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 2.7e-17 92.0 77 66.2
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 3.0e-16 88.6 63 68.3
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 1.1e-15 86.7 76 56.6
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 4.8e-14 81.3 72 58.3
Solyc04g077110.3 Solanum lycopersicum HOM05D007049 ORTHO05D008896 8.5e-11 70.5 49 83.7
Sopen00g005060 Solanum pennellii HOM05D007049 ORTHO05D008896 2.5e-10 68.9 48 83.3
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 1.5e-07 59.7 46 63.0
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 1.3e-06 56.6 83 38.6


User provided reference genes

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