Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 2.2e-90 335.5 160 100.0
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 6.5e-90 334.0 160 99.4
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.4e-76 289.7 167 83.8
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 8.6e-74 280.4 167 79.6
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 3.3e-73 278.5 167 81.4
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 1.1e-68 263.5 165 75.2
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 2.7e-67 258.8 169 71.6
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 3.0e-66 255.4 169 71.6
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 5.0e-66 254.6 166 74.7
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 2.5e-65 252.3 165 73.3
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 2.5e-65 252.3 166 72.9
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 5.6e-65 251.1 167 72.5
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 2.8e-64 248.8 169 69.2
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 2.8e-64 248.8 166 70.5
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 4.7e-64 248.1 169 69.2
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 8.0e-64 247.3 167 71.9
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 8.0e-64 247.3 169 69.2
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 8.0e-64 247.3 166 71.1
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.1e-63 246.9 166 71.1
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.4e-63 246.5 169 69.8
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.4e-63 246.5 166 71.1
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.4e-63 246.5 169 68.6
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.8e-63 246.1 166 72.3
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.3e-63 245.7 169 68.6
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 4.0e-63 245.0 163 71.8
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 5.2e-63 244.6 169 69.2
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 6.8e-63 244.2 166 72.3
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 6.8e-63 244.2 166 68.7
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 6.8e-63 244.2 161 68.9
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 8.9e-63 243.8 166 68.1
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 8.9e-63 243.8 167 68.3
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.2e-62 243.4 166 69.9
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 1.5e-62 243.0 168 69.0
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 5.8e-62 241.1 171 68.4
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 7.5e-62 240.7 168 68.5
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 7.5e-62 240.7 165 69.7
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 7.5e-62 240.7 167 65.9
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 1.3e-61 240.0 166 69.9
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.7e-61 238.4 169 68.0
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 3.7e-61 238.4 169 68.0
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 4.9e-61 238.0 163 69.3
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 6.4e-61 237.7 168 67.9
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 1.9e-60 236.1 159 71.7
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 2.4e-60 235.7 165 67.3
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 3.2e-60 235.3 168 66.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 4.1e-60 235.0 169 65.7
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 5.4e-60 234.6 168 66.7
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 5.4e-60 234.6 162 66.7
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 7.0e-60 234.2 166 68.7
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 1.6e-59 233.0 168 64.9
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 6.0e-59 231.1 167 67.1
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 6.0e-59 231.1 167 67.1
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 6.0e-59 231.1 165 66.7
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 1.7e-58 229.6 168 67.3
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.7e-58 229.6 166 65.7
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 8.6e-58 227.3 166 66.3
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 8.6e-58 227.3 164 64.0
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 1.1e-57 226.9 167 66.5
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 1.5e-57 226.5 160 62.5
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 1.9e-57 226.1 170 63.5
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 3.3e-57 225.3 167 64.1
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 7.3e-57 224.2 168 63.1
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 9.5e-57 223.8 160 60.6
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 9.5e-57 223.8 160 66.2
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 1.2e-56 223.4 158 62.7
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 1.6e-56 223.0 160 65.6
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 2.1e-56 222.6 160 60.6
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 2.1e-56 222.6 160 60.6
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 2.8e-56 222.2 164 61.6
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 3.6e-56 221.9 165 65.5
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 4.7e-56 221.5 169 65.1
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 4.7e-56 221.5 167 64.7
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 8.1e-56 220.7 158 62.0
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 1.8e-55 219.5 166 62.7
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 2.3e-55 219.2 169 62.7
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 4.0e-55 218.4 155 61.3
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 1.2e-54 216.9 165 63.6
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 2.0e-54 216.1 153 66.7
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 4.4e-54 214.9 169 61.5
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 9.9e-54 213.8 167 62.3
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.2e-53 212.6 163 62.6
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.9e-53 212.2 163 62.6
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 3.7e-53 211.8 124 82.3
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 1.1e-52 210.3 165 61.8
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.9e-52 209.5 167 61.1
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.2e-51 206.8 162 63.0
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 3.0e-50 202.2 163 57.1
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 6.6e-50 201.1 145 68.3
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.9e-49 199.5 161 58.4
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 3.3e-49 198.7 161 57.8
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 7.3e-49 197.6 136 63.2
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 3.6e-48 195.3 166 59.0
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 4.7e-48 194.9 143 65.7
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 6.2e-48 194.5 136 62.5
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 2.6e-46 189.1 168 58.3
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 8.4e-45 184.1 168 58.3
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 2.7e-43 179.1 168 54.8
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.0e-42 177.2 155 52.9
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 2.3e-42 176.0 158 50.6
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 6.6e-42 174.5 169 54.4
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 1.5e-41 173.3 175 54.3
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 9.6e-41 170.6 170 54.1
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 2.8e-40 169.1 141 59.6
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 4.7e-40 168.3 129 67.4
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 7.6e-38 161.0 158 51.3
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 9.9e-38 160.6 118 65.3
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 2.4e-36 156.0 84 88.1
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.2e-35 153.7 151 54.3
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.0e-34 150.6 161 44.7
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 3.9e-34 148.7 159 47.2
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 1.1e-31 140.6 143 51.0
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 2.0e-30 136.3 158 44.3
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 5.8e-30 134.8 146 47.3
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 2.5e-25 119.4 131 51.9
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 7.4e-25 117.9 89 66.3
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 9.6e-25 117.5 96 59.4
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 1.9e-17 93.2 149 40.9
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 3.5e-11 72.4 44 70.5
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 6.7e-10 68.2 90 44.4
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 3.1e-07 59.3 117 34.2


User provided reference genes

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