Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 2.5e-85 318.9 181 100.0
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 9.7e-82 307.0 181 88.4
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 3.6e-68 261.9 175 86.3
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 2.7e-60 235.7 189 68.3
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 4.7e-60 235.0 170 80.6
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 3.0e-59 232.3 196 66.3
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.7e-49 199.9 184 61.4
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 2.2e-33 146.4 109 65.1
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 2.9e-33 146.0 111 64.9
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.9e-32 143.3 109 63.3
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 1.9e-32 143.3 174 47.7
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 2.4e-32 142.9 110 61.8
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 3.2e-32 142.5 101 69.3
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 4.1e-32 142.1 105 64.8
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 5.4e-32 141.7 105 62.9
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 7.0e-32 141.4 103 66.0
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 9.2e-32 141.0 99 66.7
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 1.6e-31 140.2 105 63.8
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 2.0e-31 139.8 167 47.9
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 3.5e-31 139.0 92 70.7
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 4.6e-31 138.7 104 65.4
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 4.6e-31 138.7 103 68.9
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 4.6e-31 138.7 117 61.5
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 7.8e-31 137.9 87 71.3
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 7.8e-31 137.9 100 65.0
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 1.0e-30 137.5 205 44.9
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 2.3e-30 136.3 90 70.0
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 6.6e-30 134.8 95 68.4
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 6.6e-30 134.8 102 65.7
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 6.6e-30 134.8 107 60.7
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 8.6e-30 134.4 87 66.7
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 1.1e-29 134.0 71 81.7
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 1.5e-29 133.7 162 52.5
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 1.5e-29 133.7 84 75.0
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 1.9e-29 133.3 92 69.6
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 1.9e-29 133.3 114 70.2
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 1.9e-29 133.3 76 77.6
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 2.5e-29 132.9 77 75.3
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 2.5e-29 132.9 101 64.4
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 3.3e-29 132.5 92 67.4
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 3.3e-29 132.5 81 75.3
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 4.3e-29 132.1 110 57.3
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 4.3e-29 132.1 174 48.9
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 5.6e-29 131.7 87 72.4
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 7.3e-29 131.3 95 65.3
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 7.3e-29 131.3 82 70.7
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 7.3e-29 131.3 76 80.3
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 9.5e-29 131.0 79 72.2
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 9.5e-29 131.0 84 73.8
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 1.2e-28 130.6 104 63.5
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 1.2e-28 130.6 102 63.7
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 1.2e-28 130.6 70 80.0
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.6e-28 130.2 82 70.7
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 1.6e-28 130.2 137 51.1
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 2.1e-28 129.8 111 58.6
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 2.8e-28 129.4 170 49.4
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 3.6e-28 129.0 83 73.5
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 3.6e-28 129.0 69 81.2
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 4.7e-28 128.6 70 84.3
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 1.1e-27 127.5 103 59.2
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 1.4e-27 127.1 74 70.3
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 1.4e-27 127.1 82 69.5
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.4e-27 127.1 82 69.5
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.4e-27 127.1 82 69.5
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 1.4e-27 127.1 103 60.2
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 1.8e-27 126.7 103 61.2
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 1.8e-27 126.7 111 56.8
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 1.8e-27 126.7 76 75.0
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 2.3e-27 126.3 163 47.2
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 2.3e-27 126.3 91 65.9
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 3.1e-27 125.9 75 76.0
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 3.1e-27 125.9 110 56.4
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 3.1e-27 125.9 69 79.7
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 4.0e-27 125.6 83 68.7
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 4.0e-27 125.6 88 65.9
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 5.2e-27 125.2 77 75.3
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 6.8e-27 124.8 94 63.8
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 6.8e-27 124.8 108 61.1
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 6.8e-27 124.8 88 65.9
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 8.9e-27 124.4 89 66.3
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 1.5e-26 123.6 80 70.0
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 2.6e-26 122.9 87 69.0
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 7.5e-26 121.3 77 72.7
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 9.8e-26 120.9 71 74.6
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 1.3e-25 120.6 75 69.3
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 1.7e-25 120.2 88 61.4
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 2.2e-25 119.8 70 72.9
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 2.2e-25 119.8 70 72.9
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 2.2e-25 119.8 79 69.6
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 2.9e-25 119.4 70 72.9
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 2.9e-25 119.4 70 72.9
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 2.9e-25 119.4 63 81.0
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 3.7e-25 119.0 70 72.9
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 3.7e-25 119.0 70 72.9
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 3.7e-25 119.0 70 72.9
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 6.4e-25 118.2 105 59.0
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 6.4e-25 118.2 64 76.6
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 6.4e-25 118.2 64 76.6
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 3.2e-24 115.9 98 54.1
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 1.2e-23 114.0 70 70.0
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 2.3e-22 109.8 95 49.5
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 2.5e-21 106.3 91 58.2
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 7.3e-21 104.8 53 81.1
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 2.1e-20 103.2 78 60.3
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 3.0e-14 82.8 69 50.7
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 9.6e-13 77.8 65 49.2
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 1.6e-07 60.5 49 49.0


User provided reference genes

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