Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 7.8e-67 257.3 160 100.0
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.7e-53 211.8 151 82.8
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 1.9e-49 199.5 152 71.1
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 2.2e-29 132.9 151 55.6
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 6.4e-29 131.3 151 55.6
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.9e-28 129.8 151 53.6
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.2e-28 129.0 150 56.0
Solyc08g082380.1 Solanum lycopersicum HOM05D011491 ORTHO05D009078 2.3e-26 122.9 153 54.2
PGSC0003DMG400012145 Solanum tuberosum HOM05D011491 ORTHO05D009078 1.1e-25 120.6 149 50.3
Peaxi162Scf00074g00091 Petunia axillaris HOM05D011491 ORTHO05D009078 2.1e-24 116.3 148 50.7
Peaxi162Scf00074g00092 Petunia axillaris HOM05D011491 ORTHO05D009078 3.8e-21 105.5 130 50.8
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.5e-20 102.8 147 49.7
Nitab4.5_0002782g0020 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.3e-18 97.1 143 49.0
Nitab4.5_0002782g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.3e-18 96.3 123 51.2
Nitab4.5_0009000g0010 Nicotiana tabacum HOM05D011491 ORTHO05D009078 5.8e-14 81.6 119 62.2
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.7e-11 72.8 138 41.3
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 3.5e-11 72.4 144 39.6
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.1e-11 71.6 138 41.3
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.8e-10 70.1 51 68.6
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.8e-10 70.1 51 68.6
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 1.8e-10 70.1 116 43.1
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 2.3e-10 69.7 114 43.9
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 8.7e-10 67.8 50 66.0
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 8.7e-10 67.8 47 66.0
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 8.7e-10 67.8 47 72.3
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 8.7e-10 67.8 47 68.1
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.1e-09 67.4 51 64.7
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.9e-09 66.6 47 63.8
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.9e-09 66.6 138 38.4
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.5e-09 66.2 51 62.7
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 2.5e-09 66.2 48 62.5
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 3.3e-09 65.9 47 61.7
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 4.3e-09 65.5 138 34.8
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.3e-09 65.5 47 61.7
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.3e-09 65.5 47 61.7
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.3e-09 65.5 47 61.7
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 5.7e-09 65.1 47 68.1
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 7.4e-09 64.7 135 31.9
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 7.4e-09 64.7 47 66.0
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 2.2e-08 63.2 53 56.6
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.2e-08 63.2 53 56.6
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 3.7e-08 62.4 51 52.9
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 4.8e-08 62.0 53 56.6
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 6.3e-08 61.6 46 63.0
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 8.2e-08 61.2 55 56.4
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 8.2e-08 61.2 47 61.7
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 1.1e-07 60.8 128 38.3
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-07 60.8 111 37.8
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 1.1e-07 60.8 54 51.9
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.4e-07 60.5 47 57.4
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 1.8e-07 60.1 46 56.5
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 1.8e-07 60.1 46 56.5
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 2.4e-07 59.7 46 58.7
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 3.1e-07 59.3 49 59.2
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 3.1e-07 59.3 50 52.0
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 3.1e-07 59.3 49 57.1
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 4.1e-07 58.9 46 60.9
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 5.3e-07 58.5 46 60.9
Nitab4.5_0001210g0040 Nicotiana tabacum HOM05D011491 ORTHO05D009078 5.3e-07 58.5 34 82.4
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 5.3e-07 58.5 46 54.3
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 6.9e-07 58.2 56 48.2
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 6.9e-07 58.2 49 53.1
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.9e-07 58.2 49 53.1
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.9e-07 58.2 49 53.1
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.9e-07 58.2 49 53.1
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.9e-07 58.2 49 53.1
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 6.9e-07 58.2 145 30.3
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 9.0e-07 57.8 50 52.0
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 9.0e-07 57.8 50 52.0
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 9.0e-07 57.8 46 56.5
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 1.2e-06 57.4 52 51.9
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.5e-06 57.0 49 53.1
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 1.5e-06 57.0 38 63.2
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 2.0e-06 56.6 46 56.5
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 2.0e-06 56.6 45 57.8
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 2.6e-06 56.2 42 59.5
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 3.4e-06 55.8 49 51.0
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 3.4e-06 55.8 144 29.2
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 4.5e-06 55.5 45 62.2


User provided reference genes

Program Settings