Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g028850 Solanum pennellii HOM05D008129 ORTHO05D010232 1.9e-40 168.7 84 100.0
Solyc08g080530.1 Solanum lycopersicum HOM05D008129 ORTHO05D010232 6.1e-39 163.7 84 97.6
PGSC0003DMG400003052 Solanum tuberosum HOM05D008129 ORTHO05D010232 3.7e-36 154.5 84 90.5
CAN.G981.9 Capsicum annuum HOM05D008129 ORTHO05D010232 2.6e-29 131.7 84 73.8
Nitab4.5_0003924g0090 Nicotiana tabacum HOM05D008129 ORTHO05D010232 6.4e-28 127.1 84 70.2
Dinv38993 Davidia involucrata HOM05D008129 ORTHO05D010232 1.7e-12 75.9 77 54.5
Hma1.2p1_0514F.1_g169980 Hydrangea macrophylla HOM05D008129 ORTHO05D010232 2.2e-12 75.5 78 50.0
CSS0008314 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 2.9e-12 75.1 77 50.6
Cc08_g14170 Coffea canephora HOM05D008129 ORTHO05D010232 8.4e-12 73.6 84 46.4
CSS0045994 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 1.1e-11 73.2 78 48.7
Oeu029783.1 Olea europaea HOM05D008129 ORTHO05D010232 1.2e-10 69.7 78 47.4
Rhsim07G0093300 Rhododendron simsii HOM05D008129 ORTHO05D010232 1.6e-10 69.3 78 48.7
ECA246G2221 Erigeron canadensis HOM05D008129 ORTHO05D010232 1.3e-09 66.2 79 49.4
Lj2P194T38 Lonicera japonica HOM05D008129 ORTHO05D010232 1.3e-09 66.2 74 47.3
SGA_v2.0_scaffold144G35967 Striga asiatica HOM05D008129 ORTHO05D010232 9.6e-08 60.1 79 45.6
Oeu062744.1 Olea europaea HOM05D008129 ORTHO05D010232 3.6e-07 58.2 75 46.7
COL.COLO4_05253 Corchorus olitorius HOM05D008129 ORTHO05D010232 1.1e-06 56.6 82 42.7
TAR629G0329 Trochodendron aralioides HOM05D008129 ORTHO05D010232 1.4e-06 56.2 71 42.3
EL10Ac5g12748 Beta vulgaris HOM05D008129 ORTHO05D010232 3.1e-06 55.1 72 44.4
AUR62017276 Chenopodium quinoa HOM05D008129 ORTHO05D010232 3.1e-06 55.1 76 42.1
Prupe.5G093100 Prunus persica HOM05D008129 ORTHO05D010232 3.1e-06 55.1 76 42.1
vmacro00355 Vaccinium macrocarpon HOM05D001075 ORTHO05D001779 3.1e-06 55.1 73 41.1
AUR62010633 Chenopodium quinoa HOM05D008129 ORTHO05D010232 4.0e-06 54.7 76 42.1
Dinv37674 Davidia involucrata HOM05D008129 ORTHO05D010232 6.9e-06 53.9 46 56.5


User provided reference genes

Program Settings