Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 4.2e-63 244.6 129 100.0
Solyc08g080490.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.1e-46 189.1 129 80.6
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 5.7e-36 154.5 131 68.7
CAN.G981.17 Capsicum annuum HOM05D006536 ORTHO05D005877 1.5e-31 139.8 129 63.6
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 8.0e-30 134.0 129 63.6
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.8e-27 125.6 134 56.7
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 3.7e-27 125.2 135 55.6
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 1.2e-25 120.2 123 57.7
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 5.2e-21 104.8 137 44.5
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 6.8e-21 104.4 140 50.0
CAN.G981.18 Capsicum annuum HOM05D006536 ORTHO05D005877 5.7e-20 101.3 131 43.5
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 1.6e-17 93.2 114 45.6
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 8.6e-16 87.4 127 46.5
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 2.1e-14 82.8 108 41.7
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 6.2e-14 81.3 129 41.1
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 6.2e-14 81.3 104 43.3
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 1.4e-13 80.1 129 41.9
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 1.8e-13 79.7 128 39.1
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 4.0e-13 78.6 129 39.5
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 2.0e-12 76.3 114 41.2
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 3.4e-12 75.5 111 37.8
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 9.8e-12 73.9 127 38.6
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 1.9e-10 69.7 98 48.0
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 3.2e-10 68.9 128 35.9
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 1.6e-09 66.6 129 31.8
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.0e-09 66.2 124 39.5
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 1.7e-08 63.2 133 38.3
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 1.7e-08 63.2 121 36.4
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.7e-08 63.2 132 36.4
Migut.H00699 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.9e-08 62.0 128 36.7
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.9e-08 62.0 128 35.9
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 6.6e-08 61.2 114 37.7
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.6e-08 61.2 127 34.6
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.1e-07 60.5 121 36.4
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.1e-07 60.5 119 35.3
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.1e-07 60.5 95 36.8
QL08p012979 Quercus lobata HOM05D006536 ORTHO05D005877 1.1e-07 60.5 115 35.7
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 1.9e-07 59.7 115 30.4
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 1.9e-07 59.7 120 29.2
SalBow3G0084 Salvia bowleyana HOM05D003262 ORTHO05D003608 2.5e-07 59.3 146 30.1
PSO541G3913 Papaver somniferum HOM05D006536 ORTHO05D005877 3.3e-07 58.9 128 33.6
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 3.3e-07 58.9 118 30.5
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 4.3e-07 58.5 98 36.7
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 5.6e-07 58.2 132 36.4
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 5.6e-07 58.2 121 38.0
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.6e-07 58.2 118 34.7
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.6e-07 58.2 124 37.1
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.6e-07 58.2 124 37.1
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.6e-07 58.2 124 37.1
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 7.3e-07 57.8 114 36.0
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 7.3e-07 57.8 121 36.4
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 7.3e-07 57.8 129 35.7
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 9.5e-07 57.4 125 36.8
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 9.5e-07 57.4 120 35.8
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 9.5e-07 57.4 126 36.5
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 1.6e-06 56.6 129 35.7
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 1.6e-06 56.6 119 37.0
HanXRQChr11g0337791 Helianthus annuus HOM05D009374 ORTHO05D012864 1.6e-06 56.6 136 34.6
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 1.6e-06 56.6 127 33.1
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 1.6e-06 56.6 127 28.3
CDE11G0553 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 2.1e-06 56.2 126 34.1
QL08p013066 Quercus lobata HOM05D006536 ORTHO05D005877 2.1e-06 56.2 104 43.3
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.1e-06 56.2 111 36.0
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 2.8e-06 55.8 127 33.1
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 3.6e-06 55.5 112 30.4
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 6.2e-06 54.7 116 34.5
PSO478G5239 Papaver somniferum HOM05D006536 ORTHO05D005877 6.2e-06 54.7 128 33.6
PSO541G5532 Papaver somniferum HOM05D006536 ORTHO05D005877 8.1e-06 54.3 119 34.5
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 8.1e-06 54.3 133 30.8


User provided reference genes

Program Settings