Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g028800 Solanum pennellii HOM05D006536 ORTHO05D005877 5.1e-60 234.2 115 100.0
Solyc08g080480.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.1e-58 228.8 115 97.4
Nitab4.5_0003924g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.3e-36 156.4 113 69.0
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 4.3e-35 151.4 113 69.0
CAN.G981.18 Capsicum annuum HOM05D006536 ORTHO05D005877 1.8e-33 146.0 110 64.5
Nitab4.5_0005213g0050 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.7e-23 112.8 105 55.2
Peaxi162Scf00714g00432 Petunia axillaris HOM05D006536 ORTHO05D005877 7.2e-22 107.5 94 57.4
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 2.1e-21 105.9 116 50.0
Migut.H00699 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.0e-20 103.6 113 49.6
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 4.3e-19 98.2 114 45.6
CAN.G981.16 Capsicum annuum HOM05D006536 ORTHO05D005877 1.4e-17 93.2 114 46.5
CAN.G981.17 Capsicum annuum HOM05D006536 ORTHO05D005877 2.9e-15 85.5 104 48.1
SGA_v2.0_scaffold20G09060 Striga asiatica HOM05D006536 ORTHO05D005877 1.1e-14 83.6 95 46.3
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 1.9e-14 82.8 108 42.6
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 1.9e-14 82.8 106 39.6
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 3.6e-13 78.6 103 38.8
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.1e-13 77.8 103 40.8
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 1.0e-12 77.0 103 40.8
Solyc08g080490.3 Solanum lycopersicum HOM05D006536 ORTHO05D005877 1.4e-12 76.6 114 38.6
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 1.8e-12 76.3 108 41.7
SHI26637 Sapria himalayana HOM05D006536 ORTHO05D005877 2.0e-11 72.8 98 36.7
SHI26633 Sapria himalayana HOM05D006536 ORTHO05D005877 5.7e-11 71.2 98 35.7
SHI31832 Sapria himalayana HOM05D006536 ORTHO05D005877 5.7e-11 71.2 102 38.2
SHI26638 Sapria himalayana HOM05D006536 ORTHO05D005877 3.7e-10 68.6 98 35.7
SHI26644 Sapria himalayana HOM05D006536 ORTHO05D005877 3.7e-10 68.6 101 33.7
CiPaw.12G126700 Carya illinoinensis HOM05D006536 ORTHO05D005877 1.4e-09 66.6 103 37.9
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 2.4e-09 65.9 103 37.9
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 4.1e-09 65.1 107 40.2
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 2.6e-08 62.4 106 37.7
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 3.4e-08 62.0 108 33.3
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.5e-08 61.6 107 39.3
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 4.5e-08 61.6 106 37.7
ClCG09G018590 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.0e-07 60.5 104 32.7
ClCG10G005680 Citrullus lanatus HOM05D006536 ORTHO05D005877 1.0e-07 60.5 104 31.7
Peaxi162Scf00450g00854 Petunia axillaris HOM05D006536 ORTHO05D005877 1.0e-07 60.5 103 35.9
MELO3C025418.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.3e-07 60.1 104 31.7
PSO541G4685 Papaver somniferum HOM05D006536 ORTHO05D005877 1.7e-07 59.7 104 37.5
Hma1.2p1_0745F.1_g212040 Hydrangea macrophylla HOM05D006536 ORTHO05D005877 2.2e-07 59.3 104 36.5
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-07 59.3 107 35.5
CANSAT11G1392 Cannabis sativa HOM05D006536 ORTHO05D005877 2.9e-07 58.9 102 36.3
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 2.9e-07 58.9 104 34.6
PGR083G2006 Punica granatum HOM05D006536 ORTHO05D005877 2.9e-07 58.9 107 31.8
Manes.03G123600 Manihot esculenta HOM05D006536 ORTHO05D005877 6.5e-07 57.8 102 35.3
ClCG10G005660 Citrullus lanatus HOM05D006536 ORTHO05D005877 8.5e-07 57.4 107 30.8
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 8.5e-07 57.4 109 27.5
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 1.1e-06 57.0 112 33.9
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 1.1e-06 57.0 133 31.6
Manes.03G123501 Manihot esculenta HOM05D006536 ORTHO05D005877 1.1e-06 57.0 105 37.1
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-06 57.0 119 30.3
MELO3C032238.2 Cucumis melo HOM05D006536 ORTHO05D005877 1.4e-06 56.6 93 32.3
PSO782G1199 Papaver somniferum HOM05D006536 ORTHO05D005877 1.4e-06 56.6 63 42.9
vmacro11763 Vaccinium macrocarpon HOM05D006536 ORTHO05D005877 1.4e-06 56.6 103 30.1
CsaV3_3G005360 Cucumis sativus L. HOM05D006536 ORTHO05D005877 3.2e-06 55.5 97 32.0
Nn1g07021 Nelumbo nucifera HOM05D023228 ORTHO05D005877 3.2e-06 55.5 104 37.5
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 4.2e-06 55.1 107 33.6
PSO675G9181 Papaver somniferum HOM05D006536 ORTHO05D005877 4.2e-06 55.1 104 36.5
QL08p013125 Quercus lobata HOM05D009374 ORTHO05D005877 4.2e-06 55.1 101 31.7
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 7.2e-06 54.3 108 34.3
Nitab4.5_0001479g0060 Nicotiana tabacum HOM05D006536 ORTHO05D005877 9.4e-06 53.9 107 35.5


User provided reference genes

Program Settings