Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 0.0e+00 1606.7 822 100.0
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 0.0e+00 1580.8 822 98.3
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 0.0e+00 1541.2 822 95.9
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 0.0e+00 1425.2 823 88.8
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 0.0e+00 1394.4 823 87.2
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 0.0e+00 1373.2 822 86.3
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 7.3e-286 987.3 794 64.7
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 1.5e-283 979.5 825 62.5
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 1.9e-281 972.6 830 61.3
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 1.9e-281 972.6 831 61.4
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 2.1e-280 969.1 828 60.7
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 2.1e-280 969.1 824 61.3
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.7e-279 966.1 823 61.0
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 9.6e-278 960.3 823 61.0
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 5.2e-276 954.5 828 60.9
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 6.4e-274 947.6 825 62.2
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 3.6e-269 931.8 829 59.3
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.4e-268 929.9 831 58.4
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 2.0e-267 926.0 831 59.3
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 5.8e-267 924.5 830 59.2
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.3e-266 923.3 826 59.7
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 3.8e-266 921.8 828 59.1
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 2.1e-264 916.0 830 59.3
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 1.0e-263 913.7 835 58.4
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 1.3e-263 913.3 828 57.6
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 2.3e-263 912.5 833 59.2
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 5.6e-262 907.9 831 57.6
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 1.3e-261 906.7 831 57.6
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 1.3e-261 906.7 833 58.3
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 8.1e-261 904.0 823 59.3
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 1.4e-260 903.3 824 58.6
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 4.0e-260 901.7 823 59.1
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 1.2e-259 900.2 823 58.1
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 9.9e-259 897.1 810 59.3
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 2.2e-258 896.0 801 58.3
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 9.3e-257 890.6 826 56.9
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 3.5e-256 888.6 828 56.3
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 7.9e-256 887.5 828 57.0
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 3.3e-254 882.1 834 56.2
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 1.1e-252 877.1 830 56.7
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 3.1e-252 875.5 816 56.6
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 4.0e-252 875.2 800 57.4
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.5e-251 873.2 816 56.5
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 5.8e-251 871.3 796 57.9
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 5.8e-251 871.3 829 55.5
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 2.2e-250 869.4 801 57.1
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 1.1e-249 867.1 801 57.4
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 4.8e-245 851.7 833 54.1
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 2.2e-242 842.8 832 53.6
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 5.0e-242 841.6 830 54.5
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 3.2e-241 839.0 829 53.4
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 7.9e-240 834.3 832 53.0
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 1.3e-239 833.6 832 53.6
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 1.8e-239 833.2 833 53.4
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 2.5e-238 829.3 829 52.7
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 6.9e-236 821.2 837 52.6
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 5.5e-233 811.6 834 52.5
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 9.4e-233 810.8 750 56.8
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 5.1e-231 805.1 825 53.2
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 5.1e-231 805.1 833 52.2
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 2.2e-229 799.7 832 52.9
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 2.2e-229 799.7 847 51.5
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 2.6e-227 792.7 823 53.5
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 5.9e-227 791.6 759 56.8
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 5.0e-226 788.5 835 52.5
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 8.5e-226 787.7 818 52.9
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 1.5e-222 776.9 795 54.8
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 3.5e-219 765.8 648 61.9
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 1.0e-218 764.2 839 52.2
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 1.9e-217 760.0 829 50.9
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.9e-217 760.0 840 51.7
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 4.2e-217 758.8 741 54.1
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 9.4e-217 757.7 832 50.0
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 8.0e-216 754.6 833 50.5
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 8.0e-216 754.6 741 54.0
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 8.0e-216 754.6 812 52.1
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 9.7e-214 747.7 816 49.8
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 2.8e-213 746.1 801 50.9
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 1.6e-211 740.3 831 49.9
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 3.5e-211 739.2 799 50.8
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 7.7e-211 738.0 804 51.0
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 1.0e-210 737.6 830 50.0
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 2.9e-210 736.1 833 49.5
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 3.8e-210 735.7 797 51.2
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 8.5e-210 734.6 607 63.8
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.5e-209 733.8 835 49.5
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 7.2e-209 731.5 798 50.9
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 2.3e-207 726.5 826 49.0
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 6.3e-205 718.4 814 48.5
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 3.6e-200 702.6 829 49.0
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.8e-183 647.1 607 55.5
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 1.0e-178 631.3 805 44.2
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.0e-174 617.1 549 61.0
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.7e-165 587.4 608 51.8
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 7.1e-164 582.0 733 47.9
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 9.2e-164 581.6 812 42.4
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.2e-156 556.2 489 58.9
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 9.0e-151 538.5 579 50.3
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 6.0e-147 525.8 424 65.1
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.3e-136 491.5 809 38.1
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 2.2e-125 454.1 522 48.9
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.9e-125 453.8 781 41.2
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.9e-110 402.9 364 59.6
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 7.5e-97 359.4 499 47.3
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 4.8e-96 356.7 909 29.2
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.4e-95 355.1 312 60.9
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 7.7e-94 349.4 297 62.0
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 4.7e-91 340.1 877 29.3
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 5.2e-82 310.1 315 55.6
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 4.3e-76 290.4 225 68.0
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.3e-69 268.9 810 27.7
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 7.1e-63 246.5 191 64.9
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 8.3e-56 223.0 358 35.8
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.1e-55 222.6 585 31.8
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 5.4e-55 220.3 246 49.6
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 6.0e-54 216.9 562 27.2
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.5e-44 184.9 224 47.8
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 1.0e-24 119.8 214 39.7
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 3.9e-21 107.8 71 70.4
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 2.4e-18 98.6 644 23.4


User provided reference genes

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