Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.0e-129 466.8 247 100.0
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 2.9e-129 465.3 247 99.6
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.6e-124 449.5 247 96.8
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 8.8e-118 427.2 246 91.9
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.4e-114 415.2 247 89.1
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.3e-113 413.3 247 88.3
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.3e-105 386.7 247 80.6
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 8.3e-84 314.3 238 70.2
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 3.1e-83 312.4 232 70.7
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 1.6e-82 310.1 247 68.8
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.5e-82 308.9 247 65.6
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 1.7e-81 306.6 247 65.2
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 1.7e-81 306.6 245 67.3
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.7e-81 306.6 215 74.0
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 3.8e-81 305.4 214 74.3
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 6.6e-81 304.7 246 67.1
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 8.6e-81 304.3 247 66.4
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 2.5e-80 302.8 238 69.3
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 2.5e-80 302.8 211 74.4
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 2.5e-80 302.8 223 70.0
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 7.2e-80 301.2 245 66.1
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 7.2e-80 301.2 215 72.6
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 7.2e-80 301.2 247 66.0
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 1.6e-79 300.1 223 70.9
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.0e-78 297.4 247 66.0
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.0e-78 297.4 247 66.0
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 1.8e-78 296.6 248 66.5
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 4.0e-78 295.4 215 71.6
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 5.2e-78 295.0 248 64.9
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 5.2e-78 295.0 216 71.3
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 6.8e-78 294.7 216 70.4
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 6.8e-78 294.7 247 65.2
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 6.8e-78 294.7 247 63.6
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 8.9e-78 294.3 247 65.2
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.2e-77 293.9 245 64.9
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.2e-77 293.9 248 62.1
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.5e-77 293.5 206 72.8
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 3.4e-77 292.4 228 64.9
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 3.4e-77 292.4 215 72.6
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 5.7e-77 291.6 216 69.9
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 5.7e-77 291.6 245 63.7
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.3e-76 290.4 247 63.6
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.3e-76 290.4 209 70.8
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 1.3e-76 290.4 248 64.1
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 1.3e-76 290.4 238 66.0
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.3e-76 290.4 241 66.4
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 1.7e-76 290.0 215 70.2
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 4.9e-76 288.5 204 74.0
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.1e-75 287.3 245 62.9
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 1.8e-75 286.6 207 70.5
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 3.2e-75 285.8 245 64.9
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 3.2e-75 285.8 228 65.8
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 4.1e-75 285.4 230 65.7
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 7.0e-75 284.6 243 62.6
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 7.0e-75 284.6 245 62.9
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 3.5e-74 282.3 238 63.9
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 5.9e-74 281.6 209 70.3
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 1.3e-73 280.4 209 69.4
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 6.6e-73 278.1 209 69.4
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 8.6e-73 277.7 237 62.0
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.1e-72 277.3 227 62.6
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.1e-72 277.3 217 64.5
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 1.1e-72 277.3 237 62.0
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.5e-72 276.9 194 74.2
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 1.9e-72 276.6 237 61.6
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 1.9e-72 276.6 228 63.2
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 1.9e-72 276.6 228 63.2
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 5.6e-72 275.0 206 68.0
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 7.3e-72 274.6 208 67.3
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 7.3e-72 274.6 245 61.2
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 7.3e-72 274.6 219 65.8
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 1.2e-71 273.9 237 61.2
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 2.8e-71 272.7 214 63.6
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 2.8e-71 272.7 217 63.6
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 3.6e-71 272.3 214 63.6
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 6.1e-71 271.6 207 68.1
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 8.0e-71 271.2 217 63.1
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 8.0e-71 271.2 226 61.9
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.4e-70 270.4 244 60.2
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.8e-70 270.0 226 63.7
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.4e-69 265.4 208 67.8
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 1.3e-68 263.8 207 66.2
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 4.9e-68 261.9 215 63.7
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 3.2e-67 259.2 241 58.5
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 4.1e-67 258.8 233 60.5
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 3.5e-66 255.8 252 57.5
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 1.7e-65 253.4 215 61.9
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 3.0e-65 252.7 252 56.3
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 3.9e-65 252.3 247 58.3
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.5e-64 250.4 232 58.2
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 6.2e-63 245.0 206 61.2
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.7e-60 236.9 228 57.5
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 4.9e-60 235.3 218 56.4
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 1.1e-59 234.2 209 58.9
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 5.4e-59 231.9 216 56.5
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 5.4e-59 231.9 169 70.4
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 1.0e-57 227.6 185 63.2
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 1.6e-55 220.3 207 54.6
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 7.6e-53 211.5 145 73.8
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 1.9e-48 196.8 227 48.0
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 4.3e-40 169.1 157 62.4
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 7.6e-37 158.3 211 45.0
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 2.9e-36 156.4 154 55.8
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.1e-30 137.9 99 72.7
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 2.6e-29 133.3 123 61.0
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.1e-27 127.9 207 40.6
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.5e-24 117.5 103 59.2
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.8e-23 112.5 79 73.4
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 2.1e-18 97.1 203 32.5
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 9.3e-11 71.6 156 28.8
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.2e-10 71.2 65 61.5
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 3.0e-09 66.6 52 69.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 9.0e-06 55.1 46 60.9


User provided reference genes

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