Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 1.3e-218 762.7 376 100.0
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 1.8e-215 752.3 376 98.4
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 9.0e-215 750.0 376 98.1
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 3.1e-207 724.9 376 93.9
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 4.0e-207 724.5 376 93.9
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 5.7e-201 704.1 377 92.8
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 3.3e-193 678.3 376 90.4
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 2.6e-182 642.1 362 83.4
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 3.4e-182 641.7 363 84.0
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 5.9e-182 641.0 361 83.9
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 3.8e-181 638.3 365 82.7
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 9.4e-180 633.6 362 83.4
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.4e-178 629.8 361 83.7
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 1.8e-178 629.4 363 82.4
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 2.3e-178 629.0 365 80.8
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 4.4e-177 624.8 365 81.4
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 5.7e-177 624.4 367 80.9
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 9.7e-177 623.6 365 82.2
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 1.3e-176 623.2 368 80.7
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 1.7e-176 622.9 364 81.9
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 1.7e-176 622.9 364 80.2
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 3.7e-176 621.7 365 80.8
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 4.8e-176 621.3 364 79.4
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 6.3e-176 620.9 363 81.3
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 6.3e-176 620.9 362 82.3
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 8.2e-176 620.5 366 79.8
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.8e-175 619.4 363 81.5
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.8e-175 619.4 365 80.5
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 3.1e-175 618.6 364 79.9
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 9.1e-175 617.1 363 82.4
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 2.0e-174 615.9 363 80.2
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 2.0e-174 615.9 367 80.9
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 3.5e-174 615.1 367 78.7
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.5e-174 614.8 362 81.2
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 5.9e-174 614.4 369 78.9
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 5.9e-174 614.4 363 79.6
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 7.7e-174 614.0 362 79.6
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.3e-173 613.2 369 79.4
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 2.9e-173 612.1 370 78.4
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.9e-173 612.1 362 81.5
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 5.0e-173 611.3 369 78.0
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 6.5e-173 610.9 362 80.9
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 6.5e-173 610.9 362 81.2
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 8.5e-173 610.5 362 80.4
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 1.1e-172 610.1 363 79.6
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 1.9e-172 609.4 362 79.3
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 4.2e-172 608.2 362 79.8
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 9.4e-172 607.1 365 79.7
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 1.2e-171 606.7 361 78.4
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 3.6e-171 605.1 362 78.2
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 3.6e-171 605.1 364 78.0
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 4.7e-171 604.7 363 79.1
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 3.0e-170 602.1 376 76.6
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 3.9e-170 601.7 367 77.7
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 6.7e-170 600.9 363 79.6
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 3.3e-169 598.6 366 77.9
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 4.4e-169 598.2 361 78.1
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.7e-168 596.3 361 77.8
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 2.6e-166 589.0 362 76.2
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.0e-165 587.0 394 74.1
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 1.1e-164 583.6 360 77.5
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 1.1e-164 583.6 364 76.4
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 1.5e-164 583.2 380 75.0
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 4.2e-164 581.6 372 75.5
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 1.6e-163 579.7 363 76.6
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 2.1e-163 579.3 381 74.5
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.8e-162 576.2 361 77.0
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 1.8e-162 576.2 361 77.0
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 6.8e-162 574.3 360 76.4
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 8.8e-162 573.9 363 75.8
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 2.2e-160 569.3 352 76.4
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 2.8e-160 568.9 363 75.2
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 2.8e-160 568.9 363 75.2
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 4.8e-160 568.2 362 76.0
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 9.1e-159 563.9 363 74.7
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 7.7e-158 560.8 369 74.0
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 7.7e-158 560.8 378 72.5
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 1.0e-157 560.5 362 73.8
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 1.0e-157 560.5 363 73.8
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 6.5e-157 557.8 362 72.7
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 9.4e-156 553.9 368 73.1
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 9.8e-153 543.9 361 72.0
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 2.3e-149 532.7 368 69.6
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 3.0e-146 522.3 352 72.2
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 1.7e-144 516.5 301 83.4
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 4.9e-144 515.0 285 86.3
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 1.8e-143 513.1 303 80.2
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 1.9e-140 503.1 285 84.2
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 8.0e-139 497.7 369 64.0
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 3.4e-137 492.3 368 65.2
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 2.4e-135 486.1 363 65.0
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 6.6e-133 478.0 370 63.2
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 1.1e-132 477.2 268 82.5
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 5.4e-127 458.4 306 73.2
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.7e-125 453.4 267 79.8
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 1.2e-113 414.1 242 82.6
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 1.9e-108 396.7 230 84.3
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.8e-107 392.9 400 52.2
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 1.1e-106 391.0 222 80.6
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 9.9e-105 384.4 227 78.9
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 1.9e-76 290.4 180 74.4
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 1.5e-68 264.2 212 64.6
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 1.5e-47 194.5 111 79.3
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 1.6e-46 191.0 113 77.0
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 2.1e-46 190.7 114 75.4
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 1.2e-44 184.9 135 68.9
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.2e-44 184.9 115 75.7
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.4e-44 183.3 114 75.4
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.4e-44 183.3 114 75.4
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 5.4e-42 176.0 115 73.9
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.9e-32 143.7 96 74.0
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 1.4e-29 134.8 109 59.6
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 5.4e-18 96.3 57 73.7
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 2.3e-13 80.9 54 70.4
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 1.2e-12 78.6 54 68.5
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 2.0e-12 77.8 54 66.7
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 6.4e-11 72.8 54 64.8
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 8.3e-11 72.4 288 25.3
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 2.7e-09 67.4 43 65.1
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 1.5e-07 61.6 64 50.0
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 1.2e-06 58.5 204 26.5


User provided reference genes

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