Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 1.8e-105 386.0 202 100.0
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 7.0e-73 277.7 147 99.3
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 1.0e-71 273.9 144 99.3
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 4.1e-65 251.9 147 91.2
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.7e-63 246.5 149 87.9
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 3.9e-63 245.4 147 89.1
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 4.7e-61 238.4 150 84.0
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 2.2e-58 229.6 147 81.0
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 3.7e-58 228.8 147 80.3
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 6.4e-58 228.0 147 80.3
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 8.3e-58 227.6 169 72.2
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 1.9e-57 226.5 147 81.0
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 4.1e-57 225.3 154 78.6
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 5.4e-57 224.9 147 81.0
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 5.4e-57 224.9 154 79.9
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 7.1e-57 224.6 147 81.6
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 9.2e-57 224.2 147 80.3
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.2e-56 223.8 147 79.6
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 1.6e-56 223.4 147 81.0
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 1.6e-56 223.4 147 81.0
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 1.6e-56 223.4 148 79.7
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 2.7e-56 222.6 147 77.6
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 3.5e-56 222.2 147 78.2
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 3.5e-56 222.2 147 78.2
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 3.5e-56 222.2 147 78.9
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 4.6e-56 221.9 147 81.0
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 4.6e-56 221.9 147 79.6
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 4.6e-56 221.9 147 80.3
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 6.0e-56 221.5 147 77.6
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 6.0e-56 221.5 147 80.3
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 6.0e-56 221.5 147 79.6
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.3e-55 220.3 147 79.6
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.3e-55 220.3 147 79.6
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 1.7e-55 219.9 147 81.0
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 1.7e-55 219.9 147 79.6
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.3e-55 219.5 147 80.3
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.3e-55 219.5 147 80.3
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.3e-55 219.5 147 80.3
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 2.3e-55 219.5 147 78.9
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 3.0e-55 219.2 147 77.6
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 3.0e-55 219.2 147 80.3
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 5.1e-55 218.4 147 78.2
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 5.1e-55 218.4 147 78.2
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 5.1e-55 218.4 170 70.0
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 6.6e-55 218.0 145 75.9
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.1e-54 217.2 150 78.0
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.5e-54 216.9 147 79.6
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 1.5e-54 216.9 147 76.9
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.9e-54 216.5 147 79.6
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 2.5e-54 216.1 147 79.6
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 2.5e-54 216.1 149 77.2
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.5e-54 216.1 147 76.2
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 2.5e-54 216.1 147 76.2
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 3.3e-54 215.7 150 76.7
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 3.3e-54 215.7 149 79.9
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 4.3e-54 215.3 149 77.2
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 5.6e-54 214.9 148 78.4
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 5.6e-54 214.9 148 78.4
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 5.6e-54 214.9 147 75.5
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 7.3e-54 214.5 145 77.2
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 1.2e-53 213.8 145 77.9
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.2e-53 213.8 145 77.9
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 2.8e-53 212.6 147 76.9
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 2.8e-53 212.6 145 77.2
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 3.6e-53 212.2 150 78.0
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 3.6e-53 212.2 147 78.9
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 4.7e-53 211.8 147 78.2
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 6.2e-53 211.5 146 77.4
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 1.4e-52 210.3 148 77.0
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 1.4e-52 210.3 147 78.2
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 4.0e-52 208.8 149 75.2
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 5.2e-52 208.4 147 76.2
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 8.9e-52 207.6 147 76.2
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.5e-51 206.8 152 73.0
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 1.5e-51 206.8 139 77.7
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 2.0e-51 206.5 147 73.5
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 2.6e-51 206.1 140 78.6
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 2.6e-51 206.1 155 73.5
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 4.4e-51 205.3 147 70.1
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 5.8e-51 204.9 147 76.9
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.7e-50 203.4 150 72.7
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.7e-50 203.4 150 72.7
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 2.9e-50 202.6 148 71.6
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 2.9e-50 202.6 148 77.7
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 6.4e-50 201.4 147 72.8
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 1.9e-49 199.9 149 73.8
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 7.1e-49 198.0 150 74.0
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 3.0e-47 192.6 152 70.4
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 3.9e-47 192.2 153 71.9
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 6.6e-47 191.4 151 70.2
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 7.3e-46 188.0 155 71.0
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 1.2e-45 187.2 153 69.9
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 2.1e-45 186.4 158 68.4
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 3.6e-45 185.7 154 66.2
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 6.2e-45 184.9 147 68.7
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 1.4e-44 183.7 155 68.4
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 1.8e-44 183.3 147 68.0
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.8e-44 183.3 154 67.5
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.4e-44 183.0 147 68.7
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.0e-44 182.2 147 68.7
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 6.8e-44 181.4 154 68.2
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 8.9e-44 181.0 151 66.2
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 8.9e-44 181.0 109 88.1
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.2e-43 180.6 147 68.7
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 6.4e-42 174.9 152 64.5
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 7.1e-41 171.4 138 68.8
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 7.1e-41 171.4 138 68.8
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 2.7e-40 169.5 161 59.0
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 2.3e-39 166.4 105 80.0
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 3.9e-39 165.6 152 63.2
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 5.1e-39 165.2 113 81.4
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 6.6e-39 164.9 147 63.3
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 3.3e-38 162.5 149 63.8
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 1.8e-36 156.8 149 57.7
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 4.9e-34 148.7 148 60.8
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 6.4e-34 148.3 140 64.3
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 1.9e-33 146.7 147 59.2
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 1.9e-33 146.7 100 75.0
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 3.3e-30 136.0 133 59.4
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 2.8e-29 132.9 104 70.2
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 2.8e-29 132.9 104 70.2
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 8.1e-29 131.3 153 52.9
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 1.1e-28 131.0 88 77.3
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 1.1e-28 131.0 90 74.4
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 2.0e-27 126.7 133 53.4
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 8.4e-26 121.3 152 50.0
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 2.7e-24 116.3 168 47.0
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 6.9e-20 101.7 79 64.6
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 1.5e-19 100.5 78 66.7
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.5e-19 100.5 92 60.9
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 1.4e-17 94.0 79 54.4
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 2.5e-17 93.2 69 63.8
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 4.2e-17 92.4 71 64.8
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 4.2e-17 92.4 71 64.8
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 7.1e-17 91.7 69 65.2
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 7.1e-17 91.7 71 64.8
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 9.3e-17 91.3 69 65.2
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 9.3e-17 91.3 157 42.0
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.2e-16 90.9 69 63.8
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 1.8e-15 87.0 145 43.4
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 3.0e-15 86.3 151 39.7
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.4e-12 76.6 78 47.4
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 1.5e-11 73.9 74 48.6
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 8.4e-10 68.2 70 44.3
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 1.9e-09 67.0 131 34.4
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 4.6e-08 62.4 122 41.0
HPP92_014777 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.8e-07 60.5 72 45.8
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 3.9e-07 59.3 72 40.3
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 1.1e-06 57.8 51 54.9


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