Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 9.2e-184 646.7 323 100.0
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 3.5e-183 644.8 323 99.7
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 1.3e-177 626.3 323 96.6
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 9.6e-157 557.0 317 87.1
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 3.9e-150 535.0 293 90.1
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 6.0e-143 511.1 328 78.4
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 2.3e-142 509.2 321 79.4
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 1.0e-137 493.8 319 78.4
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 6.5e-137 491.1 325 75.1
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 4.2e-136 488.4 324 74.4
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 1.0e-134 483.8 281 85.4
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 3.0e-134 482.3 324 72.8
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 1.1e-133 480.3 323 74.0
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 3.3e-133 478.8 317 74.4
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 7.4e-133 477.6 317 74.1
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 7.4e-133 477.6 317 73.8
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 9.6e-133 477.2 323 71.2
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 2.8e-132 475.7 317 75.1
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 2.8e-132 475.7 324 73.5
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 4.8e-132 474.9 324 74.4
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 2.0e-130 469.5 318 74.8
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 3.4e-130 468.8 325 74.5
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 4.5e-130 468.4 322 74.5
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 5.9e-130 468.0 321 71.3
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 7.6e-130 467.6 312 76.0
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 7.6e-130 467.6 290 81.7
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 2.9e-129 465.7 319 72.4
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 6.5e-129 464.5 312 75.3
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 2.5e-128 462.6 316 74.1
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 2.5e-128 462.6 316 71.8
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 4.2e-128 461.8 320 72.2
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 1.6e-127 459.9 323 73.4
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 2.1e-127 459.5 319 71.8
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 4.6e-127 458.4 318 72.0
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 2.3e-126 456.1 318 72.3
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 5.1e-126 454.9 315 72.4
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 1.1e-125 453.8 315 72.7
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 1.5e-125 453.4 323 70.9
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 1.9e-125 453.0 315 72.1
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 5.7e-125 451.4 319 70.2
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 9.7e-125 450.7 323 71.5
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 2.8e-124 449.1 322 70.2
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 2.8e-124 449.1 325 69.8
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 2.8e-124 449.1 312 71.5
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.4e-123 446.8 323 70.0
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 2.4e-123 446.0 327 68.8
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 2.4e-123 446.0 347 66.3
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 1.5e-122 443.4 317 69.1
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 7.7e-122 441.0 312 70.8
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 1.0e-121 440.7 321 69.8
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 1.0e-121 440.7 321 69.8
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 2.9e-121 439.1 321 69.5
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 2.9e-121 439.1 316 69.6
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 3.8e-121 438.7 312 70.5
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 6.5e-121 438.0 310 72.9
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 1.1e-120 437.2 276 75.7
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 1.9e-120 436.4 318 69.2
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 1.2e-119 433.7 320 69.7
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 4.6e-119 431.8 302 70.2
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 7.9e-119 431.0 332 65.4
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 7.9e-119 431.0 318 67.9
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 1.0e-118 430.6 323 67.2
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 3.0e-118 429.1 323 66.9
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 1.5e-117 426.8 317 66.2
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 1.5e-117 426.8 321 66.0
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 2.0e-117 426.4 312 72.4
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 4.4e-117 425.2 279 77.4
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 1.7e-116 423.3 315 68.9
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 2.2e-116 422.9 319 70.5
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 4.8e-116 421.8 304 71.4
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 9.1e-115 417.5 317 65.0
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 9.1e-115 417.5 415 56.6
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 1.4e-112 410.2 316 65.5
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 4.2e-112 408.7 317 66.2
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 4.7e-111 405.2 317 64.4
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 1.0e-110 404.1 317 64.0
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 3.0e-110 402.5 312 64.4
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 3.0e-110 402.5 317 64.0
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 3.0e-110 402.5 309 65.7
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 3.9e-110 402.1 317 64.0
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 8.8e-110 401.0 317 63.7
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 8.8e-110 401.0 315 66.3
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 1.5e-109 400.2 308 65.6
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 4.4e-109 398.7 316 66.5
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 2.8e-108 396.0 323 61.6
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 3.7e-108 395.6 320 62.8
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 4.8e-108 395.2 324 63.6
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 6.3e-108 394.8 319 63.3
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 2.4e-107 392.9 308 66.9
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 9.1e-107 391.0 319 62.1
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 3.5e-106 389.0 320 62.5
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 7.7e-106 387.9 338 57.1
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 3.2e-104 382.5 300 64.7
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 6.7e-102 374.8 330 60.6
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 1.2e-101 374.0 229 79.0
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.6e-98 363.6 308 64.0
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 8.5e-97 357.8 243 74.5
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 1.1e-96 357.5 266 65.4
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 1.7e-92 343.6 315 60.6
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 2.8e-92 342.8 321 55.8
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 9.5e-80 301.2 195 74.4
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 2.0e-53 213.8 244 52.5
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 1.2e-47 194.5 320 35.9
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 2.6e-45 186.8 308 38.6
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 2.7e-42 176.8 235 46.0
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 3.5e-42 176.4 142 63.4
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 1.7e-41 174.1 303 35.6
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 6.6e-41 172.2 316 31.6
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 1.1e-40 171.4 303 35.3
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 1.5e-40 171.0 303 35.6
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 1.8e-38 164.1 133 62.4
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.4e-35 154.5 248 41.9
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 3.0e-33 146.7 184 47.3
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 3.0e-25 120.2 140 50.0
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 1.2e-21 108.2 77 67.5
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 1.4e-19 101.3 118 49.2


User provided reference genes

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