Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g025980 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-91 339.3 165 100.0
CAN.G1674.1 Capsicum annuum HOM05D004392 ORTHO05D004846 7.4e-12 74.7 92 40.2
PGSC0003DMG400013069 Solanum tuberosum HOM05D000003 ORTHO05D000004 8.1e-11 71.2 76 44.7
PGSC0003DMG400014363 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.0e-10 68.9 73 34.2
PGSC0003DMG400024990 Solanum tuberosum HOM05D000003 ORTHO05D000004 5.3e-10 68.6 75 40.0
Sopen06g008270 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-09 67.0 46 54.3
PGSC0003DMG400006509 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.5e-09 67.0 75 38.7
PGSC0003DMG400009750 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.0e-09 66.6 75 37.3
PGSC0003DMG400003909 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.6e-09 64.7 60 46.7
PGSC0003DMG400013620 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.6e-09 64.7 75 38.7
Sopen11g018640 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-08 63.9 72 34.7
Sopen11g002080 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-08 63.5 66 34.8
PGSC0003DMG400027303 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.2e-08 63.2 83 38.6
Sopen08g012750 Solanum pennellii HOM05D003567 ORTHO05D004117 1.4e-07 60.5 86 32.6
PGSC0003DMG403018810 Solanum tuberosum HOM05D000003 ORTHO05D000004 1.9e-07 60.1 75 36.0
Cpa.g.sc10.168 Carica papaya HOM05D000003 ORTHO05D000004 2.5e-07 59.7 88 37.5
MBI10_g16721_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.2e-07 59.3 88 33.0
vmacro20784 Vaccinium macrocarpon HOM05D010927 ORTHO05D000004 3.2e-07 59.3 76 40.8
PGSC0003DMG400011299 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.2e-07 58.9 75 34.7
Sopen07g006490 Solanum pennellii HOM05D000003 ORTHO05D000004 5.5e-07 58.5 72 29.2
MBI10_g47168_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.3e-07 57.8 76 35.5
QL03p051323 Quercus lobata HOM05D000144 ORTHO05D000004 9.3e-07 57.8 76 36.8
MBI04_g06213_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.2e-06 57.4 78 35.9
CAN.G630.33 Capsicum annuum HOM05D000177 ORTHO05D000004 2.1e-06 56.6 60 41.7
MBI13_g34916_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.1e-06 56.6 83 28.9
PGSC0003DMG402011647 Solanum tuberosum HOM05D002779 ORTHO05D003074 2.7e-06 56.2 81 32.1
Cpa.g.sc140.5 Carica papaya HOM05D000003 ORTHO05D000004 3.5e-06 55.8 57 42.1
Medtr8g037280 Medicago truncatula HOM05D000003 ORTHO05D000004 3.5e-06 55.8 86 41.9
MBI01_g01229_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D000004 4.6e-06 55.5 53 37.7
Sopen02g009420 Solanum pennellii HOM05D002138 ORTHO05D000004 4.6e-06 55.5 50 52.0
PGSC0003DMG400016171 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.6e-06 55.5 85 32.9
Atru.chr10.61 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-06 55.1 71 38.0
PGSC0003DMG400039590 Solanum tuberosum HOM05D000004 ORTHO05D000004 6.0e-06 55.1 59 40.7
Cpa.g.sc2.104 Carica papaya HOM05D000003 ORTHO05D000004 7.9e-06 54.7 109 31.2
QL02p038779 Quercus lobata HOM05D000803 ORTHO05D007008 7.9e-06 54.7 96 32.3


User provided reference genes

Program Settings