Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 7.5e-55 216.9 103 100.0
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 7.5e-55 216.9 103 100.0
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.7e-54 215.7 103 99.0
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 3.7e-54 214.5 103 99.0
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.1e-50 203.0 103 92.2
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.1e-49 198.7 103 91.3
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 7.5e-39 163.7 103 75.7
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 2.4e-37 158.7 106 76.4
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 3.2e-37 158.3 106 75.5
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 7.0e-37 157.1 100 81.0
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 9.2e-37 156.8 112 71.4
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 1.6e-36 156.0 106 73.6
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 2.1e-36 155.6 106 75.5
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.0e-36 154.1 108 72.2
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.0e-36 154.1 108 72.2
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 6.0e-36 154.1 108 72.2
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 7.8e-36 153.7 104 75.0
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 1.1e-34 149.8 103 72.8
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 5.6e-34 147.5 103 70.9
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 3.6e-33 144.8 111 70.3
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 6.2e-33 144.1 109 68.8
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 6.2e-33 144.1 105 65.7
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 8.1e-33 143.7 103 70.9
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 3.1e-32 141.7 104 70.2
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 5.2e-32 141.0 99 66.7
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 6.8e-32 140.6 92 75.0
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 6.8e-32 140.6 108 69.4
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 8.9e-32 140.2 108 67.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.5e-31 139.4 88 73.9
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.6e-31 138.7 103 68.0
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 2.6e-31 138.7 101 65.3
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 4.4e-31 137.9 103 68.9
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 1.3e-30 136.3 107 64.5
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 2.2e-30 135.6 109 63.3
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 3.7e-30 134.8 103 68.9
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 6.4e-30 134.0 100 67.0
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 6.4e-30 134.0 103 68.0
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.9e-29 132.5 105 68.6
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 1.9e-29 132.5 110 60.9
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 3.2e-29 131.7 105 65.7
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 4.1e-29 131.3 103 64.1
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 4.1e-29 131.3 103 63.1
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 5.4e-29 131.0 103 67.0
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 5.4e-29 131.0 103 62.1
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 5.4e-29 131.0 103 61.2
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 7.1e-29 130.6 107 61.7
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 7.1e-29 130.6 107 61.7
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 9.2e-29 130.2 103 64.1
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 9.2e-29 130.2 104 65.4
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 9.2e-29 130.2 103 61.2
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 9.2e-29 130.2 103 63.1
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 62.1
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 1.2e-28 129.8 103 59.2
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 1.2e-28 129.8 106 64.2
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 1.2e-28 129.8 105 63.8
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.6e-28 129.4 103 62.1
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 2.7e-28 128.6 107 64.5
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 3.5e-28 128.3 67 86.6
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.5e-28 128.3 103 64.1
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 3.5e-28 128.3 103 64.1
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 4.6e-28 127.9 103 65.0
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 6.0e-28 127.5 103 61.2
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 6.0e-28 127.5 103 63.1
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 6.0e-28 127.5 100 61.0
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 7.8e-28 127.1 103 62.1
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 7.8e-28 127.1 103 62.1
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 7.8e-28 127.1 103 62.1
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.0e-27 126.7 103 63.1
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.0e-27 126.7 103 63.1
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.0e-27 126.7 104 64.4
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.3e-27 126.3 111 57.7
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 1.3e-27 126.3 103 59.2
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 1.3e-27 126.3 109 60.6
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.7e-27 125.9 103 65.0
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 1.7e-27 125.9 103 63.1
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 3.0e-27 125.2 73 82.2
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 3.9e-27 124.8 103 63.1
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 3.9e-27 124.8 103 63.1
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 3.9e-27 124.8 106 63.2
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 3.9e-27 124.8 103 64.1
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 5.1e-27 124.4 103 61.2
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 5.1e-27 124.4 103 65.0
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 5.1e-27 124.4 107 60.7
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 5.1e-27 124.4 110 60.0
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 6.6e-27 124.0 103 64.1
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 6.6e-27 124.0 103 64.1
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 8.6e-27 123.6 103 61.2
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 1.1e-26 123.2 106 60.4
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 1.5e-26 122.9 103 63.1
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.5e-26 122.9 103 62.1
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 1.5e-26 122.9 107 61.7
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 1.9e-26 122.5 106 59.4
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 3.3e-26 121.7 104 63.5
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 4.3e-26 121.3 106 62.3
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 4.3e-26 121.3 103 58.3
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 5.6e-26 120.9 109 60.6
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 5.6e-26 120.9 105 59.0
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 9.5e-26 120.2 103 61.2
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.8e-25 118.6 103 60.2
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 3.6e-25 118.2 103 63.1
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 3.6e-25 118.2 105 57.1
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 4.7e-25 117.9 106 58.5
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 6.2e-25 117.5 108 59.3
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 8.1e-25 117.1 103 59.2
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.4e-24 115.5 109 60.6
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 5.2e-24 114.4 119 53.8
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 1.5e-23 112.8 103 58.3
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.5e-23 112.8 103 58.3
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 1.5e-23 112.8 106 55.7
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 9.9e-23 110.2 109 55.0
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 4.9e-22 107.8 103 51.5
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 4.9e-22 107.8 84 66.7
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 1.9e-21 105.9 86 64.0
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 1.2e-20 103.2 104 54.8
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 1.0e-19 100.1 64 71.9
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 2.3e-19 99.0 103 51.5
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 6.2e-17 90.9 55 81.8
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 8.1e-17 90.5 54 64.8
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 8.1e-17 90.5 98 51.0
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.8e-16 89.4 87 51.7
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 7.6e-15 84.0 52 67.3
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 7.6e-15 84.0 113 41.6
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 4.9e-14 81.3 134 38.1
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 6.4e-14 80.9 90 44.4
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.4e-13 79.7 71 53.5
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.4e-13 79.7 64 54.7
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 5.1e-11 71.2 115 40.9
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 1.1e-10 70.1 44 68.2
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 5.6e-10 67.8 67 53.7


User provided reference genes

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