Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 1.4e-48 196.1 106 100.0
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 7.2e-45 183.7 104 94.2
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 4.9e-41 171.0 93 97.8
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 1.8e-40 169.1 102 87.3
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 5.9e-39 164.1 93 93.5
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 1.5e-37 159.5 93 91.4
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 3.3e-37 158.3 93 89.2
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 5.6e-37 157.5 93 88.2
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 1.6e-36 156.0 93 88.2
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 1.2e-28 129.8 91 75.8
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 6.2e-28 127.5 100 75.0
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 1.0e-27 126.7 91 76.9
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 1.2e-26 123.2 100 72.0
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 2.0e-26 122.5 98 69.4
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 2.6e-26 122.1 91 74.7
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 5.8e-26 120.9 91 73.6
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 5.8e-26 120.9 91 73.6
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 3.7e-25 118.2 92 70.7
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 1.1e-24 116.7 93 71.0
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 7.0e-24 114.0 100 64.0
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 7.0e-24 114.0 86 68.6
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 9.2e-24 113.6 96 61.5
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 1.2e-23 113.2 86 67.4
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 2.0e-23 112.5 96 63.5
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 3.5e-23 111.7 85 67.1
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 7.8e-23 110.5 94 62.8
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 1.0e-22 110.2 96 62.5
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 1.7e-22 109.4 83 68.7
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 3.0e-22 108.6 101 60.4
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 3.0e-22 108.6 101 60.4
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 3.0e-22 108.6 101 60.4
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 6.6e-22 107.5 101 59.4
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.1e-21 106.7 101 59.4
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.1e-21 106.7 101 59.4
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 1.5e-21 106.3 93 60.2
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 7.3e-21 104.0 101 58.4
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 7.3e-21 104.0 86 66.3
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 1.2e-20 103.2 86 62.8
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 1.6e-20 102.8 91 63.7
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 2.8e-20 102.1 96 57.3
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 3.6e-20 101.7 86 60.5
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 3.6e-20 101.7 99 58.6
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 4.7e-20 101.3 98 61.2
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 8.1e-20 100.5 94 59.6
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 8.1e-20 100.5 97 59.8
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 1.4e-19 99.8 101 56.4
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 1.8e-19 99.4 86 60.5
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 2.3e-19 99.0 62 74.2
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 2.3e-19 99.0 100 58.0
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 3.1e-19 98.6 92 60.9
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 4.0e-19 98.2 86 60.5
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 4.0e-19 98.2 86 60.5
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 5.2e-19 97.8 86 60.5
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 5.2e-19 97.8 86 59.3
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 6.8e-19 97.4 88 58.0
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 8.9e-19 97.1 86 59.3
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 1.2e-18 96.7 83 62.7
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 1.5e-18 96.3 86 58.1
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 1.5e-18 96.3 83 61.4
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 1.5e-18 96.3 83 61.4
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 2.0e-18 95.9 85 62.4
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 2.0e-18 95.9 86 58.1
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 2.0e-18 95.9 90 55.6
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 3.4e-18 95.1 85 58.8
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 9.8e-18 93.6 86 58.1
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 9.8e-18 93.6 87 54.0
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 1.3e-17 93.2 86 57.0
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 1.3e-17 93.2 99 49.5
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 2.2e-17 92.4 97 53.6
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 2.9e-17 92.0 98 59.2
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 4.9e-17 91.3 84 53.6
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 8.3e-17 90.5 84 53.6
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 1.1e-16 90.1 92 58.7
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 1.9e-16 89.4 73 67.1
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 2.4e-16 89.0 94 57.4
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 1.2e-15 86.7 90 55.6
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 1.6e-15 86.3 103 54.4
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 1.6e-15 86.3 85 61.2
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 3.5e-15 85.1 89 55.1
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 4.6e-15 84.7 67 62.7
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 6.0e-15 84.3 90 54.4
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 1.0e-14 83.6 91 50.5
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 1.0e-14 83.6 91 50.5
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 1.0e-14 83.6 120 44.2
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 1.7e-14 82.8 89 53.9
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 2.3e-14 82.4 77 61.0
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 3.0e-14 82.0 63 65.1
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 3.9e-14 81.6 89 53.9
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 1.5e-13 79.7 72 58.3
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 2.5e-13 79.0 56 67.9
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 2.5e-13 79.0 129 43.4
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 7.3e-13 77.4 83 56.6
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 9.5e-13 77.0 90 55.6
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 1.2e-12 76.6 89 52.8
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 8.1e-12 73.9 87 51.7
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 1.3e-09 66.6 66 54.5
Phvul.002G138300 Phaseolus vulgaris HOM05D007450 ORTHO05D009377 4.9e-09 64.7 89 48.3
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 1.1e-08 63.5 89 44.9
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 1.4e-08 63.2 51 60.8
COL.COLO4_16968 Corchorus olitorius HOM05D007450 ORTHO05D009377 5.4e-08 61.2 42 66.7
CARHR033090 Cardamine hirsuta HOM05D007450 ORTHO05D009377 6.0e-07 57.8 39 64.1


User provided reference genes

Program Settings