Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g025050 Solanum pennellii HOM05D004519 ORTHO05D006283 7.7e-256 886.7 470 100.0
Solyc08g076470.4 Solanum lycopersicum HOM05D004519 ORTHO05D006283 1.0e-252 876.3 445 99.1
CAN.G726.25 Capsicum annuum HOM05D004519 ORTHO05D006283 1.9e-222 775.8 460 87.2
Nitab4.5_0000529g0120 Nicotiana tabacum HOM05D004519 ORTHO05D006283 1.5e-203 713.0 457 78.6
Oeu027094.2 Olea europaea HOM05D004519 ORTHO05D006283 1.2e-171 607.1 449 66.1
Dinv29004 Davidia involucrata HOM05D004519 ORTHO05D006283 1.5e-171 606.7 439 70.2
Dinv25262 Davidia involucrata HOM05D004519 ORTHO05D006283 1.9e-169 599.7 388 75.8
Migut.E00743 Erythranthe guttata HOM05D004519 ORTHO05D006283 1.9e-169 599.7 433 68.6
CSS0024637 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 7.9e-168 594.3 435 68.7
GSVIVG01013060001 Vitis vinifera HOM05D004519 ORTHO05D006283 1.0e-167 594.0 438 68.3
Peaxi162Scf00170g00818 Petunia axillaris HOM05D004519 ORTHO05D006283 1.1e-166 590.5 402 74.6
Cc08_g03490 Coffea canephora HOM05D004519 ORTHO05D006283 5.6e-166 588.2 451 67.4
Hma1.2p1_1569F.1_g291200 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 9.6e-166 587.4 434 66.8
Nn3g19385 Nelumbo nucifera HOM05D004519 ORTHO05D006283 5.8e-163 578.2 444 64.4
Ciclev10001047m.g Citrus clementina HOM05D004519 ORTHO05D006283 8.4e-162 574.3 407 68.3
Cfa012505 Carpinus fangiana HOM05D004519 ORTHO05D006283 5.5e-161 571.6 447 65.3
SGA_v2.0_scaffold198G41070 Striga asiatica HOM05D004519 ORTHO05D006283 2.1e-160 569.7 473 61.9
FvH4_5g23060 Fragaria vesca HOM05D004519 ORTHO05D006283 3.5e-160 568.9 403 66.7
FAN18G3814 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.5e-160 568.9 403 66.7
RcHm_v2.0_Chr7g0211781 Rosa chinensis HOM05D004519 ORTHO05D006283 4.6e-160 568.5 404 66.6
FAN04G1490 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.3e-159 567.0 403 66.3
Potri.001G136600 Populus trichocarpa HOM05D004519 ORTHO05D006283 5.1e-159 565.1 450 62.0
CiPaw.12G068400 Carya illinoinensis HOM05D004519 ORTHO05D006283 2.5e-158 562.8 393 69.5
FAN13G3061 Fragaria x ananassa HOM05D004519 ORTHO05D006283 2.5e-158 562.8 405 65.7
MSTRG.24848 Avicennia marina HOM05D004519 ORTHO05D006283 3.3e-158 562.4 452 62.2
HanXRQChr03g0083251 Helianthus annuus HOM05D004519 ORTHO05D006283 4.8e-157 558.5 443 64.8
Manes.17G018849 Manihot esculenta HOM05D004519 ORTHO05D006283 4.8e-157 558.5 449 63.3
MD16G1279400 Malus domestica HOM05D004519 ORTHO05D006283 1.1e-156 557.4 401 66.1
FAN18G1908 Fragaria x ananassa HOM05D004519 ORTHO05D006283 1.4e-156 557.0 419 64.0
Lj4g0001331 Lotus japonicus HOM05D004519 ORTHO05D006283 2.4e-156 556.2 377 72.7
Gorai.004G182200 Gossypium raimondii HOM05D004519 ORTHO05D006283 4.1e-156 555.4 444 62.8
CiPaw.11G098500 Carya illinoinensis HOM05D004519 ORTHO05D006283 5.3e-156 555.1 458 62.2
Sc01g0007150 Simmondsia chinensis HOM05D004519 ORTHO05D006283 9.0e-156 554.3 402 67.2
Nn1g00218 Nelumbo nucifera HOM05D004519 ORTHO05D006283 2.0e-155 553.1 433 64.0
MD06G1026700 Malus domestica HOM05D004519 ORTHO05D006283 7.7e-155 551.2 401 65.8
Aqoxy3G02176 Aquilegia oxysepala HOM05D004519 ORTHO05D006283 2.2e-154 549.7 452 61.3
CANSAT01G0127 Cannabis sativa HOM05D004519 ORTHO05D006283 2.9e-154 549.3 354 73.4
Lsat_1_v5_gn_6_80100 Lactuca sativa HOM05D004519 ORTHO05D006283 5.0e-154 548.5 444 61.0
CsaV3_3G048840 Cucumis sativus L. HOM05D004519 ORTHO05D006283 1.9e-153 546.6 392 67.6
TAR629G2035 Trochodendron aralioides HOM05D004519 ORTHO05D006283 5.5e-153 545.0 463 61.8
VMungo1215G0394 Vigna mungo HOM05D004519 ORTHO05D006283 1.2e-152 543.9 386 67.9
PGR042G1943 Punica granatum HOM05D004519 ORTHO05D006283 4.6e-152 542.0 434 60.6
HanXRQChr13g0414231 Helianthus annuus HOM05D004519 ORTHO05D006283 6.1e-152 541.6 445 62.9
MELO3C003440.2 Cucumis melo HOM05D004519 ORTHO05D006283 7.9e-152 541.2 390 67.9
Eucgr.E00228 Eucalyptus grandis HOM05D004519 ORTHO05D006283 7.9e-152 541.2 397 65.0
Gorai.007G033500 Gossypium raimondii HOM05D004519 ORTHO05D006283 1.4e-151 540.4 391 67.0
CSS0001538 Camellia sinensis var. sinensis HOM05D004519 ORTHO05D006283 2.3e-151 539.7 333 76.6
Nitab4.5_0012493g0010 Nicotiana tabacum HOM05D004519 ORTHO05D006283 3.0e-151 539.3 295 87.5
Glyma.01G014200 Glycine max HOM05D004519 ORTHO05D006283 5.1e-151 538.5 366 70.2
Glyma.09G207900 Glycine max HOM05D004519 ORTHO05D006283 1.1e-150 537.3 366 69.9
ECA240G3299 Erigeron canadensis HOM05D004519 ORTHO05D006283 1.5e-150 537.0 425 63.3
PSO063G4347 Papaver somniferum HOM05D004519 ORTHO05D006283 1.5e-150 537.0 455 59.1
Lalb_Chr09g0325481 Lupinus albus HOM05D004519 ORTHO05D006283 2.0e-150 536.6 451 60.1
Medtr5g029230 Medicago truncatula HOM05D004519 ORTHO05D006283 2.0e-150 536.6 377 68.2
Gohir.A11G028600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 2.5e-150 536.2 389 66.6
THA.LOC104812759 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 2.5e-150 536.2 417 64.5
Aa31LG2G13810 Aethionema arabicum HOM05D004519 ORTHO05D006283 4.3e-150 535.4 441 59.6
PSO782G3212 Papaver somniferum HOM05D004519 ORTHO05D006283 4.3e-150 535.4 455 59.1
Rhsim11G0021900 Rhododendron simsii HOM05D004519 ORTHO05D006283 7.4e-150 534.6 564 52.0
AT1G32200 Arabidopsis thaliana HOM05D004519 ORTHO05D006283 1.3e-149 533.9 455 58.5
Gohir.D11G030600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 1.7e-149 533.5 389 65.8
MBI04_g32203_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 1.7e-149 533.5 473 57.9
Thhalv10007540m.g Eutrema salsugineum HOM05D004519 ORTHO05D006283 2.2e-149 533.1 472 56.6
Lj2A231G41 Lonicera japonica HOM05D004519 ORTHO05D006283 3.7e-149 532.3 466 61.2
Psat2g139000 Pisum sativum HOM05D004519 ORTHO05D006283 3.7e-149 532.3 366 69.1
Lalb_Chr16g0381061 Lupinus albus HOM05D004519 ORTHO05D006283 4.8e-149 531.9 366 68.6
AL1G46330 Arabidopsis lyrata HOM05D004519 ORTHO05D006283 6.3e-149 531.6 457 57.5
Carub.0001s3053 Capsella rubella HOM05D004519 ORTHO05D006283 1.1e-148 530.8 455 57.8
BcaB07g32892 Brassica carinata HOM05D004519 ORTHO05D006283 4.1e-148 528.9 437 60.2
A09p34000 Brassica napus HOM05D004519 ORTHO05D006283 4.1e-148 528.9 446 59.0
Sabra01G0105700 Salix brachista HOM05D004519 ORTHO05D006283 4.1e-148 528.9 448 58.9
BcaC05g27251 Brassica carinata HOM05D004519 ORTHO05D006283 5.3e-148 528.5 395 63.5
BcaC05g27905 Brassica carinata HOM05D004519 ORTHO05D006283 5.3e-148 528.5 452 59.1
A05p25130 Brassica napus HOM05D004519 ORTHO05D006283 6.9e-148 528.1 447 58.4
BraA05t21393Z Brassica rapa HOM05D004519 ORTHO05D006283 6.9e-148 528.1 447 58.4
Duzib205G0301 Durio zibethinus HOM05D004519 ORTHO05D006283 6.9e-148 528.1 426 63.1
Sp1g27880 Schrenkiella parvula HOM05D004519 ORTHO05D006283 6.9e-148 528.1 468 56.8
C05p31600 Brassica napus HOM05D004519 ORTHO05D006283 1.5e-147 526.9 395 63.5
BolC5t31883H Brassica oleracea HOM05D004519 ORTHO05D006283 1.5e-147 526.9 395 63.5
Phvul.002G136600 Phaseolus vulgaris HOM05D004519 ORTHO05D006283 1.5e-147 526.9 381 66.4
Ca_25177_v3 Cicer arietinum L. HOM05D004519 ORTHO05D006283 2.0e-147 526.6 356 71.3
Gohir.A03G000032 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.4e-147 525.8 459 59.0
TPR.G19434 Trifolium pratense HOM05D004519 ORTHO05D006283 3.4e-147 525.8 392 64.8
THA.LOC104814413 Tarenaya hassleriana HOM05D004519 ORTHO05D006283 7.7e-147 524.6 455 59.1
CARHR031570 Cardamine hirsuta HOM05D004519 ORTHO05D006283 1.0e-146 524.2 465 58.1
BcaB04g17996 Brassica carinata HOM05D004519 ORTHO05D006283 2.2e-146 523.1 446 58.1
Sed0022223 Sechium edule HOM05D004519 ORTHO05D006283 2.2e-146 523.1 405 62.7
BcaB03g13753 Brassica carinata HOM05D004519 ORTHO05D006283 6.5e-146 521.5 456 57.0
BcaC07g37628 Brassica carinata HOM05D004519 ORTHO05D006283 2.5e-145 519.6 447 57.7
BolC8t47999H Brassica oleracea HOM05D004519 ORTHO05D006283 2.5e-145 519.6 448 57.6
ClCG09G011630 Citrullus lanatus HOM05D004519 ORTHO05D006283 3.2e-145 519.2 450 59.8
Gorai.003G185500 Gossypium raimondii HOM05D004519 ORTHO05D006283 5.5e-145 518.5 459 58.2
DCAR_008221 Daucus carota HOM05D004519 ORTHO05D006283 9.4e-145 517.7 373 68.4
A08p09320 Brassica napus HOM05D004519 ORTHO05D006283 6.1e-144 515.0 447 57.5
BraA08t32930Z Brassica rapa HOM05D004519 ORTHO05D006283 6.1e-144 515.0 447 57.5
vmacro00276 Vaccinium macrocarpon HOM05D004519 ORTHO05D006283 3.3e-142 509.2 329 73.3
Prupe.5G027200 Prunus persica HOM05D004519 ORTHO05D006283 1.1e-140 504.2 400 61.8
ATR0829G164 Amborella trichopoda HOM05D004519 ORTHO05D006283 9.1e-140 501.1 423 58.9
Zm00001eb224960 Zea mays HOM05D004519 ORTHO05D006283 2.6e-139 499.6 411 60.6
Os10g0577900 Oryza sativa ssp. japonica HOM05D004519 ORTHO05D006283 3.5e-139 499.2 362 64.9
QL12p001672 Quercus lobata HOM05D004519 ORTHO05D006283 1.2e-136 490.7 487 52.8
CDE12G0245 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 3.6e-136 489.2 369 63.1
Gohir.D03G176300 Gossypium hirsutum HOM05D004519 ORTHO05D006283 3.6e-136 489.2 333 70.6
Zm00001eb025080 Zea mays HOM05D004519 ORTHO05D006283 4.7e-136 488.8 389 62.0
BraA09t38946Z Brassica rapa HOM05D004519 ORTHO05D006283 3.0e-135 486.1 446 56.3
SEGI_02196 Sequoiadendron giganteum HOM05D004519 ORTHO05D006283 3.0e-135 486.1 364 64.0
unitig_32.g10899 Utricularia gibba HOM05D004519 ORTHO05D006283 3.0e-135 486.1 402 58.7
AUR62007353 Chenopodium quinoa HOM05D004519 ORTHO05D006283 5.2e-135 485.3 427 56.9
arahy.Tifrunner.gnm1.ann1.BI8WMI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.5e-134 483.8 375 61.1
arahy.Tifrunner.gnm1.ann1.D9NVDI Arachis hypogaea HOM05D004519 ORTHO05D006283 1.5e-134 483.8 375 61.1
AUR62018641 Chenopodium quinoa HOM05D004519 ORTHO05D006283 5.7e-134 481.9 352 65.3
C05p39140 Brassica napus HOM05D004519 ORTHO05D006283 9.7e-134 481.1 429 56.9
Thecc.03G310400 Theobroma cacao HOM05D004519 ORTHO05D006283 4.1e-132 475.7 408 60.8
Duzib068G1409 Durio zibethinus HOM05D004519 ORTHO05D006283 3.5e-131 472.6 431 58.2
Mapoly0045s0098 Marchantia polymorpha HOM05D004519 ORTHO05D006283 5.7e-126 455.3 374 57.5
CDE04G2515 Ceratophyllum demersum HOM05D004519 ORTHO05D006283 3.7e-125 452.6 423 54.4
Haze_08164 Corylus avellana HOM05D004519 ORTHO05D006283 1.4e-124 450.7 317 70.0
FAN08G3243 Fragaria x ananassa HOM05D004519 ORTHO05D006283 3.5e-123 446.0 358 60.3
Gohir.D08G174500 Gossypium hirsutum HOM05D004519 ORTHO05D006283 4.5e-123 445.7 377 60.2
EL10Ac5g12013 Beta vulgaris HOM05D004519 ORTHO05D006283 7.7e-123 444.9 411 55.7
Gohir.A08G153600 Gossypium hirsutum HOM05D004519 ORTHO05D006283 6.5e-122 441.8 377 59.9
HanXRQChr06g0172791 Helianthus annuus HOM05D004519 ORTHO05D006283 9.8e-118 427.9 354 60.7
SMO244G0022 Selaginella moellendorffii HOM05D004519 ORTHO05D006283 9.1e-116 421.4 352 56.0
HPP92_020895 Vanilla planifolia HOM05D004519 ORTHO05D006283 8.6e-114 414.8 297 68.0
Actinidia01317 Actinidia chinensis HOM05D004519 ORTHO05D006283 2.8e-112 409.8 311 68.2
Pp3c7_2970 Physcomitrium patens HOM05D004519 ORTHO05D006283 4.7e-112 409.1 386 48.7
EL10Ac5g12011 Beta vulgaris HOM05D004519 ORTHO05D006283 4.0e-111 406.0 386 54.7
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 2.6e-110 403.3 413 49.2
DCAR_004271 Daucus carota HOM05D004519 ORTHO05D006283 2.3e-106 390.2 248 72.6
CBR_g4494 Chara braunii HOM05D004519 ORTHO05D006283 1.7e-101 374.0 398 47.2
Haze_08160 Corylus avellana HOM05D004519 ORTHO05D006283 4.1e-100 369.4 255 71.4
Eucgr.E01634 Eucalyptus grandis HOM05D004519 ORTHO05D006283 4.7e-96 355.9 254 66.1
Cpa.g.sc208.3 Carica papaya HOM05D004519 ORTHO05D006283 4.0e-95 352.8 216 74.1
Atru.chr6.1525 Acer truncatum HOM05D004519 ORTHO05D006283 3.3e-89 333.2 206 76.2
Cre02.g143000 Chlamydomonas reinhardtii HOM05D004519 ORTHO05D006283 2.4e-76 290.4 360 41.9
PRCOL_00006772 Prasinoderma coloniale HOM05D004519 ORTHO05D006283 5.6e-65 252.7 283 45.6
Actinidia29340 Actinidia chinensis HOM05D004519 ORTHO05D006283 7.3e-65 252.3 272 53.3
MCO03G317 Micromonas commoda HOM05D004519 ORTHO05D006283 4.0e-63 246.5 274 46.7
Hma1.2p1_3246F.1_g334370 Hydrangea macrophylla HOM05D004519 ORTHO05D006283 4.6e-51 206.5 175 60.0
MBI15_g25773_MAGBIO Magnolia biondii HOM05D004519 ORTHO05D006283 1.5e-33 148.3 93 75.3
Cpa.g.sc208.5 Carica papaya HOM05D004519 ORTHO05D006283 1.8e-31 141.4 197 42.6
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 1.7e-29 134.8 106 63.2
PGSC0003DMG401014796 Solanum tuberosum HOM05D004519 ORTHO05D006283 5.5e-28 129.8 93 72.0
HanXRQChr16g0500211 Helianthus annuus HOM05D004519 ORTHO05D006283 3.9e-26 123.6 73 79.5
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 3.0e-18 97.4 108 48.1
Haze_20066 Corylus avellana HOM05D004519 ORTHO05D007437 1.1e-17 95.5 101 48.5
Actinidia01316 Actinidia chinensis HOM05D004519 ORTHO05D006283 6.3e-16 89.7 68 60.3
Gohir.D08G117301 Gossypium hirsutum HOM05D004519 ORTHO05D017048 4.2e-12 77.0 56 66.1
Gohir.D11G228750 Gossypium hirsutum HOM05D004519 ORTHO05D017048 4.2e-12 77.0 56 66.1
Gohir.D11G251850 Gossypium hirsutum HOM05D004519 ORTHO05D017048 4.2e-12 77.0 56 66.1
Gohir.D13G135501 Gossypium hirsutum HOM05D004519 ORTHO05D017048 1.2e-11 75.5 56 64.3
Gorai.008G116000 Gossypium raimondii HOM05D004519 ORTHO05D017048 4.7e-11 73.6 55 63.6
RcHm_v2.0_Chr5g0062811 Rosa chinensis HOM05D004519 ORTHO05D017048 1.5e-09 68.6 54 53.7
Actinidia29341 Actinidia chinensis HOM05D004519 ORTHO05D052920 3.4e-09 67.4 32 87.5
COL.COLO4_16939 Corchorus olitorius HOM05D004519 ORTHO05D006283 3.4e-09 67.4 72 51.4


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