Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 3.6e-166 588.2 300 100.0
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 1.2e-164 583.2 300 99.0
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 2.6e-148 528.9 300 90.7
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 9.6e-111 404.1 284 76.4
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 4.5e-108 395.2 283 75.6
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 2.1e-105 386.3 287 71.1
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 7.0e-77 291.6 298 57.4
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 6.6e-51 205.3 318 44.7
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 4.4e-47 192.6 306 42.8
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 7.5e-47 191.8 315 43.2
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 9.8e-47 191.4 315 43.2
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 2.1e-41 173.7 317 40.1
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 1.1e-40 171.4 329 38.9
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 1.1e-40 171.4 344 39.5
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 3.1e-40 169.9 312 38.5
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 6.8e-40 168.7 316 40.5
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 3.4e-39 166.4 316 41.5
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 5.8e-39 165.6 327 40.4
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 3.7e-38 162.9 310 37.7
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 4.1e-37 159.5 342 38.9
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 3.5e-36 156.4 330 40.9
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 7.8e-36 155.2 340 36.2
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 7.8e-36 155.2 320 36.2
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 2.3e-35 153.7 320 38.1
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 2.3e-35 153.7 334 35.3
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.1e-35 152.5 330 40.3
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 1.5e-34 151.0 308 37.7
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 4.3e-34 149.4 316 39.6
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 4.3e-34 149.4 308 37.3
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 9.5e-34 148.3 306 37.3
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 2.1e-33 147.1 319 36.4
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 2.1e-33 147.1 314 40.1
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 4.7e-33 146.0 319 36.4
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 6.2e-33 145.6 330 40.0
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 2.3e-32 143.7 330 37.9
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 3.1e-32 143.3 320 37.5
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 3.1e-32 143.3 299 39.5
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 4.0e-32 142.9 261 40.2
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 5.2e-32 142.5 318 37.7
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 8.9e-32 141.7 316 37.0
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 1.2e-31 141.4 308 37.0
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 5.8e-31 139.0 318 38.1
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 9.9e-31 138.3 318 39.0
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 2.2e-30 137.1 320 34.4
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 2.2e-30 137.1 316 35.4
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 2.9e-30 136.7 330 35.5
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 4.9e-30 136.0 321 33.6
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.9e-29 134.0 320 34.4
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 1.9e-29 134.0 315 36.8
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 4.1e-29 132.9 306 34.6
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 5.4e-29 132.5 329 36.2
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 5.4e-29 132.5 310 37.1
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 3.5e-28 129.8 307 34.5
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 4.6e-28 129.4 312 36.2
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 3.0e-27 126.7 318 34.3
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 5.1e-27 125.9 313 37.4
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 8.6e-27 125.2 304 35.9
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 1.1e-26 124.8 324 34.9
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.9e-26 124.0 262 38.9
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 3.3e-26 123.2 314 35.4
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 1.2e-25 121.3 323 32.8
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 1.2e-25 121.3 323 32.8
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 1.2e-25 121.3 287 34.1
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 1.6e-25 120.9 256 38.7
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 8.1e-25 118.6 332 35.5
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 2.4e-24 117.1 252 37.3
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 4.0e-24 116.3 312 34.6
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 4.4e-23 112.8 320 32.2
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 9.9e-23 111.7 261 36.0
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 3.8e-22 109.8 309 33.7
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.1e-21 108.2 301 35.2
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 1.9e-21 107.5 303 32.3
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 3.2e-21 106.7 306 33.0
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 3.2e-21 106.7 301 34.6
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 4.6e-20 102.8 304 32.2
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 1.0e-19 101.7 302 32.5
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 1.3e-19 101.3 271 34.7
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 1.7e-19 100.9 294 33.0
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 2.3e-19 100.5 305 35.1
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 2.3e-19 100.5 342 31.6
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 5.1e-19 99.4 338 30.2
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 4.3e-18 96.3 293 31.7
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 9.6e-18 95.1 246 32.9
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 1.2e-15 88.2 300 29.3
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 7.6e-15 85.5 235 34.0
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 7.1e-13 79.0 332 27.7
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 9.3e-13 78.6 235 33.6
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 2.3e-11 73.9 311 28.6
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 1.9e-10 70.9 332 26.2
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 3.3e-10 70.1 167 35.9
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 2.8e-09 67.0 150 36.7
PGSC0003DMG400003786 Solanum tuberosum HOM05D038993 ORTHO05D009464 2.2e-06 57.4 29 86.2
THA.LOC104798612 Tarenaya hassleriana HOM05D007538 ORTHO05D009464 2.9e-06 57.0 184 31.5


User provided reference genes

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