Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g024810 Solanum pennellii HOM05D014523 ORTHO05D012193 1.5e-49 199.1 93 100.0
Solyc08g076170.1 Solanum lycopersicum HOM05D014523 ORTHO05D012193 4.6e-43 177.6 83 100.0
Peaxi162Scf00052g00333 Petunia axillaris HOM05D014523 ORTHO05D012193 1.3e-18 96.3 82 59.8
PGSC0003DMG400009326 Solanum tuberosum HOM05D014523 ORTHO05D012193 1.4e-15 86.3 84 54.8
Rhsim11G0028100 Rhododendron simsii HOM05D014523 ORTHO05D012193 3.5e-11 71.6 76 48.7
Potri.001G135100 Populus trichocarpa HOM05D014523 ORTHO05D012193 3.9e-10 68.2 87 44.8
Ciclev10003017m.g Citrus clementina HOM05D014523 ORTHO05D012193 1.5e-09 66.2 81 48.1
Thecc.03G312000 Theobroma cacao HOM05D023955 ORTHO05D012193 1.6e-08 62.8 73 43.8
QL12p000174 Quercus lobata HOM05D014320 ORTHO05D012193 3.6e-08 61.6 73 47.9
Sabra01G0104500 Salix brachista HOM05D014523 ORTHO05D012193 4.8e-08 61.2 75 46.7
Glyma.09G210100 Glycine max HOM05D014320 ORTHO05D012193 6.2e-08 60.8 76 43.4
Gohir.D08G173600 Gossypium hirsutum HOM05D023955 ORTHO05D012193 6.2e-08 60.8 80 46.2
Gorai.004G181300 Gossypium raimondii HOM05D023955 ORTHO05D012193 6.2e-08 60.8 80 46.2
COL.COLO4_16914 Corchorus olitorius HOM05D023955 ORTHO05D012193 8.1e-08 60.5 73 42.5
Phvul.002G133900 Phaseolus vulgaris HOM05D014320 ORTHO05D012193 3.1e-07 58.5 75 38.7
Glyma.01G011000 Glycine max HOM05D014320 ORTHO05D012193 5.3e-07 57.8 76 40.8
Lalb_Chr16g0380951 Lupinus albus HOM05D014320 ORTHO05D012193 5.3e-07 57.8 78 35.9
Lj2g0001586 Lotus japonicus HOM05D014320 ORTHO05D012193 6.9e-07 57.4 75 38.7
Lalb_Chr05g0215671 Lupinus albus HOM05D014320 ORTHO05D012193 4.4e-06 54.7 76 40.8
Medtr5g027950 Medicago truncatula HOM05D014320 ORTHO05D012193 7.6e-06 53.9 72 40.3


User provided reference genes

Program Settings