Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 7.0e-208 728.0 442 100.0
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 1.0e-190 671.0 419 95.7
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 7.5e-178 628.2 419 88.8
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 1.1e-163 581.3 337 89.9
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 3.6e-156 556.2 391 82.1
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 1.3e-140 504.6 311 81.0
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 9.0e-139 498.4 347 73.2
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 2.0e-138 497.3 346 74.3
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 4.5e-138 496.1 343 77.3
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 9.3e-136 488.4 310 79.0
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 2.1e-135 487.3 315 77.8
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 3.5e-135 486.5 316 77.8
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 7.9e-135 485.3 341 73.9
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 3.0e-134 483.4 312 78.5
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 3.0e-134 483.4 312 78.8
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 1.9e-133 480.7 310 77.1
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 2.5e-133 480.3 333 73.3
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 3.3e-133 479.9 342 72.8
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 5.7e-133 479.2 317 77.6
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 7.4e-133 478.8 310 77.7
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 1.3e-132 478.0 334 72.8
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.6e-132 477.6 312 79.5
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 2.2e-132 477.2 308 78.9
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 6.3e-132 475.7 337 72.7
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 6.3e-132 475.7 311 77.8
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 8.2e-132 475.3 319 74.0
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 8.2e-132 475.3 319 74.0
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 8.2e-132 475.3 317 77.3
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 1.1e-131 474.9 305 77.0
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.1e-131 474.9 316 77.5
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.8e-131 474.2 337 72.4
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 1.8e-131 474.2 332 75.0
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 1.8e-131 474.2 313 77.3
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 4.1e-131 473.0 337 72.1
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 3.4e-130 469.9 308 76.9
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 7.7e-130 468.8 312 75.6
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 7.7e-130 468.8 347 71.5
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 7.7e-130 468.8 306 77.5
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 1.0e-129 468.4 308 77.3
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 1.3e-129 468.0 306 75.8
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.3e-129 468.0 311 74.9
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 1.7e-129 467.6 310 75.5
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 1.7e-129 467.6 309 79.0
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 2.2e-129 467.2 314 75.5
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 5.0e-129 466.1 314 74.8
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 5.0e-129 466.1 308 76.6
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 5.0e-129 466.1 316 74.1
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 1.1e-128 464.9 310 74.8
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 2.5e-128 463.8 311 74.6
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 3.2e-128 463.4 313 74.8
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.2e-127 461.5 316 73.4
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 2.1e-127 460.7 319 72.1
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 3.6e-127 459.9 332 73.8
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 6.1e-127 459.1 449 58.1
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 6.1e-127 459.1 307 73.0
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 2.3e-126 457.2 330 70.3
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 3.0e-126 456.8 307 76.2
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 1.1e-125 454.9 319 73.0
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 1.1e-125 454.9 319 73.0
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.1e-125 454.9 312 76.3
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 2.0e-125 454.1 309 74.1
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 2.5e-125 453.8 319 73.0
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 2.5e-125 453.8 318 72.3
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 3.3e-125 453.4 337 70.9
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 5.7e-125 452.6 307 73.6
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 7.4e-125 452.2 318 72.3
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 3.7e-124 449.9 318 72.3
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 3.7e-124 449.9 309 73.8
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 8.2e-124 448.7 319 72.1
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 8.2e-124 448.7 320 71.6
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.1e-123 448.4 317 72.2
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 1.8e-123 447.6 313 71.6
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 1.8e-123 447.6 309 72.2
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 2.4e-123 447.2 337 68.0
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 4.1e-123 446.4 341 70.7
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 5.3e-123 446.0 319 71.5
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.4e-122 443.4 326 73.0
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 3.4e-122 443.4 307 71.0
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 6.5e-121 439.1 322 69.6
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 3.2e-120 436.8 330 69.4
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 2.1e-119 434.1 313 70.3
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 5.7e-117 426.0 320 70.0
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 1.7e-116 424.5 313 69.0
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 2.8e-116 423.7 313 69.0
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 3.1e-115 420.2 383 60.3
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 2.7e-111 407.1 316 68.4
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 2.6e-106 390.6 301 66.1
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 5.9e-106 389.4 552 44.7
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 3.2e-104 383.6 254 77.2
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 8.0e-103 379.0 275 71.3
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 1.0e-102 378.6 287 65.9
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 5.2e-102 376.3 267 73.0
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 6.7e-102 375.9 305 63.0
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 2.8e-87 327.4 222 73.4
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 1.5e-85 321.6 289 57.4
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 1.8e-83 314.7 220 72.3
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 8.6e-81 305.8 221 68.8
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 6.0e-74 283.1 306 52.9
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 4.4e-69 266.9 186 73.7
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 1.3e-65 255.4 183 72.1
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 3.6e-55 220.7 171 65.5
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 7.1e-51 206.5 175 62.9
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 7.8e-50 203.0 151 66.2
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 2.1e-42 178.3 261 38.3
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 4.3e-32 144.1 158 77.2
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 2.6e-29 134.8 186 48.4
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.7e-28 132.1 69 85.5
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 3.2e-27 127.9 101 67.3
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 7.1e-27 126.7 96 67.7
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 2.1e-26 125.2 95 68.4
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 6.0e-26 123.6 87 71.3
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 1.0e-20 106.3 115 59.1
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 5.0e-20 104.0 61 82.0
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.5e-19 101.7 61 80.3
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 6.7e-17 93.6 61 78.7
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.1e-16 92.8 53 79.2
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 4.8e-15 87.4 67 70.1
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 1.3e-12 79.3 48 77.1
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 1.7e-12 79.0 48 77.1
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 8.5e-12 76.6 107 37.4
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 8.5e-12 76.6 39 92.3
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 2.5e-11 75.1 57 63.2


User provided reference genes

Program Settings