Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g023430 Solanum pennellii HOM05D008571 ORTHO05D011280 5.1e-157 557.8 293 100.0
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 3.7e-75 285.8 229 70.3
PGSC0003DMG400024370 Solanum tuberosum HOM05D008571 ORTHO05D011280 4.7e-70 268.9 243 60.9
Sopen05g024280 Solanum pennellii HOM05D008571 ORTHO05D011280 4.1e-66 255.8 200 70.0
Sopen02g010940 Solanum pennellii HOM05D008571 ORTHO05D011280 6.8e-61 238.4 174 77.6
Sopen10g024020 Solanum pennellii HOM05D008571 ORTHO05D011280 7.1e-58 228.4 204 61.8
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 5.6e-55 218.8 216 57.9
Sopen11g011280 Solanum pennellii HOM05D008571 ORTHO05D011280 3.4e-52 209.5 192 60.4
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 8.4e-51 204.9 248 51.2
Sopen10g024150 Solanum pennellii HOM05D008571 ORTHO05D011280 1.6e-49 200.7 182 61.5
Sopen10g024090 Solanum pennellii HOM05D008571 ORTHO05D011280 4.6e-49 199.1 182 61.5
Sopen01g024850 Solanum pennellii HOM05D008571 ORTHO05D011280 1.2e-41 174.5 179 53.1
Sopen03g016140 Solanum pennellii HOM05D008571 ORTHO05D011280 4.2e-34 149.4 136 58.1
PGSC0003DMG400046033 Solanum tuberosum HOM05D008571 ORTHO05D011280 9.3e-34 148.3 206 43.7
PGSC0003DMG400021964 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.1e-33 147.1 122 65.6
PGSC0003DMG400023224 Solanum tuberosum HOM05D008571 ORTHO05D011280 4.6e-33 146.0 180 49.4
PGSC0003DMG400041297 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.3e-32 144.4 140 57.1
PGSC0003DMG400040136 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.8e-32 144.1 158 55.1
Sopen02g010540 Solanum pennellii HOM05D008571 ORTHO05D011280 1.5e-31 141.0 115 66.1
PGSC0003DMG400044216 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.6e-30 137.5 112 67.0
PGSC0003DMG400045298 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.1e-30 137.1 135 54.8
PGSC0003DMG400017449 Solanum tuberosum HOM05D008571 ORTHO05D011280 3.4e-28 129.8 121 62.8
PGSC0003DMG400017450 Solanum tuberosum HOM05D008571 ORTHO05D011280 3.4e-28 129.8 121 62.8
Sopen04g014150 Solanum pennellii HOM05D008571 ORTHO05D011280 4.5e-28 129.4 180 45.6
PGSC0003DMG401023109 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.3e-27 127.9 158 47.5
Sopen07g005410 Solanum pennellii HOM05D008571 ORTHO05D011280 2.1e-25 120.6 153 47.1
Sopen07g005460 Solanum pennellii HOM05D008571 ORTHO05D011280 2.7e-25 120.2 124 54.8
Sopen05g011290 Solanum pennellii HOM05D008571 ORTHO05D011280 3.5e-25 119.8 119 54.6
Sopen00g013760 Solanum pennellii HOM05D008571 ORTHO05D011280 2.3e-24 117.1 140 49.3
Sopen06g004470 Solanum pennellii HOM05D008571 ORTHO05D011280 3.0e-24 116.7 114 53.5
Sopen07g005370 Solanum pennellii HOM05D008571 ORTHO05D000001 2.5e-23 113.6 130 49.2
PGSC0003DMG400005599 Solanum tuberosum HOM05D008571 ORTHO05D000574 3.3e-23 113.2 83 66.3
Sopen12g020480 Solanum pennellii HOM05D000002 ORTHO05D000001 8.2e-22 108.6 122 52.5
PGSC0003DMG400038206 Solanum tuberosum HOM05D008571 ORTHO05D011280 5.3e-21 105.9 86 66.3
Nitab4.5_0003901g0050 Nicotiana tabacum HOM05D000802 ORTHO05D001074 9.0e-21 105.1 143 46.9
Nitab4.5_0000619g0120 Nicotiana tabacum HOM05D000802 ORTHO05D001074 2.6e-20 103.6 231 35.1
PGSC0003DMG400004307 Solanum tuberosum HOM05D008571 ORTHO05D011280 4.5e-20 102.8 120 45.0
PGSC0003DMG400040487 Solanum tuberosum HOM05D008571 ORTHO05D395235 5.0e-19 99.4 198 35.9
Sopen00g014100 Solanum pennellii HOM05D008571 ORTHO05D011280 3.2e-18 96.7 115 51.3
CAN.G339.28 Capsicum annuum HOM05D000802 ORTHO05D001074 4.2e-18 96.3 200 38.5
Sopen04g021490 Solanum pennellii HOM05D008571 ORTHO05D011280 9.4e-18 95.1 104 51.0
Peaxi162Scf00001g00511 Petunia axillaris HOM05D000802 ORTHO05D001074 6.1e-17 92.4 193 37.3
PGSC0003DMG400011395 Solanum tuberosum HOM05D000802 ORTHO05D001074 3.9e-16 89.7 166 39.2
Solyc09g074940.3 Solanum lycopersicum HOM05D000802 ORTHO05D001074 1.5e-15 87.8 142 41.5
Sopen09g029760 Solanum pennellii HOM05D000802 ORTHO05D001074 2.0e-15 87.4 138 42.0
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 4.5e-12 76.3 124 40.3
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 2.9e-11 73.6 66 59.1
Sopen08g023440 Solanum pennellii HOM05D003027 ORTHO05D011280 1.4e-10 71.2 57 71.9
PGSC0003DMG400013955 Solanum tuberosum HOM05D000021 ORTHO05D000010 2.7e-09 67.0 62 58.1
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 2.0e-07 60.8 178 30.9
PGSC0003DMG400022002 Solanum tuberosum HOM05D008571 ORTHO05D000574 2.6e-07 60.5 40 77.5
Sopen00g003280 Solanum pennellii HOM05D008571 ORTHO05D011280 3.7e-06 56.6 51 54.9


User provided reference genes

Program Settings