Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 9.3e-57 223.4 119 100.0
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 1.0e-55 219.9 119 96.6
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 2.6e-51 205.3 119 91.6
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 3.0e-47 191.8 119 85.7
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 1.4e-44 183.0 119 85.7
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 1.5e-35 152.9 96 76.0
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 1.3e-29 133.3 119 52.1
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 6.9e-28 127.5 125 57.6
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 2.2e-26 122.5 89 74.2
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 2.9e-26 122.1 98 68.4
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 6.5e-26 120.9 98 56.1
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 6.5e-26 120.9 116 52.6
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 1.1e-25 120.2 90 60.0
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 1.9e-25 119.4 107 56.1
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 2.5e-25 119.0 91 71.4
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 5.5e-25 117.9 100 55.0
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 1.6e-24 116.3 82 62.2
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 3.5e-24 115.2 107 50.5
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 4.6e-24 114.8 89 71.9
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 6.1e-24 114.4 97 54.6
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 6.1e-24 114.4 94 67.0
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 6.1e-24 114.4 94 67.0
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 6.1e-24 114.4 92 57.6
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 6.1e-24 114.4 93 68.8
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 7.9e-24 114.0 77 77.9
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 7.9e-24 114.0 89 62.9
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 1.3e-23 113.2 99 54.5
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 1.3e-23 113.2 95 56.8
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 1.3e-23 113.2 78 60.3
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 1.8e-23 112.8 83 59.0
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 2.3e-23 112.5 94 70.2
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 2.3e-23 112.5 118 50.0
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 3.9e-23 111.7 81 70.4
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 3.9e-23 111.7 81 70.4
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 3.9e-23 111.7 96 65.6
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 3.9e-23 111.7 96 65.6
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 3.9e-23 111.7 85 52.9
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 5.1e-23 111.3 101 52.5
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 5.1e-23 111.3 103 63.1
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 5.1e-23 111.3 73 72.6
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 6.7e-23 110.9 73 65.8
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 8.7e-23 110.5 103 51.5
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 1.1e-22 110.2 105 49.5
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 1.5e-22 109.8 74 63.5
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 1.5e-22 109.8 91 58.2
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.9e-22 109.4 80 76.2
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 2.5e-22 109.0 102 52.0
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 2.5e-22 109.0 116 48.3
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 3.3e-22 108.6 98 58.2
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 4.3e-22 108.2 80 56.2
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 5.7e-22 107.8 76 61.8
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 7.4e-22 107.5 89 67.4
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 1.6e-21 106.3 72 62.5
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 2.2e-21 105.9 106 59.4
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 4.8e-21 104.8 82 53.7
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 8.2e-21 104.0 79 55.7
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 8.2e-21 104.0 83 50.6
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 1.8e-20 102.8 99 61.6
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 2.4e-20 102.4 98 63.3
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 3.1e-20 102.1 90 64.4
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 1.5e-19 99.8 117 43.6
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 1.5e-19 99.8 68 64.7
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 3.4e-19 98.6 93 62.4
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 4.5e-19 98.2 78 50.0
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 5.9e-19 97.8 78 51.3
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 8.5e-18 94.0 55 70.9
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 1.4e-17 93.2 78 48.7
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 7.2e-17 90.9 58 63.8
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 7.2e-17 90.9 79 53.2
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 2.1e-16 89.4 54 61.1
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 4.6e-16 88.2 59 61.0
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 4.6e-16 88.2 72 51.4
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 1.4e-15 86.7 62 58.1
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 3.9e-15 85.1 79 65.8
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 5.1e-15 84.7 63 54.0
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 8.8e-15 84.0 80 46.2
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 1.5e-14 83.2 57 59.6
Peaxi162Scf00213g00947 Petunia axillaris HOM05D007770 ORTHO05D009827 6.3e-13 77.8 123 41.5
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 1.8e-12 76.3 40 72.5
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 1.8e-12 76.3 84 40.5
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 9.1e-12 73.9 93 44.1
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 1.5e-11 73.2 77 41.6
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 2.0e-11 72.8 63 49.2
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 1.4e-09 66.6 37 64.9
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 2.5e-09 65.9 47 59.6
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 3.2e-09 65.5 34 82.4
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 5.5e-09 64.7 63 44.4
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 1.2e-08 63.5 30 76.7
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 2.7e-08 62.4 52 53.8


User provided reference genes

Program Settings