Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 4.4e-68 261.2 131 100.0
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 1.0e-32 143.7 84 88.1
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 1.1e-31 140.2 83 86.7
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 2.4e-29 132.5 83 80.7
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 4.0e-29 131.7 82 82.9
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 2.7e-25 119.0 147 52.4
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 1.6e-22 109.8 83 68.7
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 8.1e-22 107.5 85 68.2
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 6.9e-21 104.4 67 82.1
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 6.9e-21 104.4 85 64.7
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 1.2e-20 103.6 74 71.6
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 1.5e-20 103.2 68 75.0
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 2.0e-20 102.8 85 61.2
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 2.6e-20 102.4 72 70.8
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 2.6e-20 102.4 72 70.8
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 2.6e-20 102.4 85 63.5
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 4.5e-20 101.7 74 68.9
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 4.5e-20 101.7 68 70.6
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 5.8e-20 101.3 72 69.4
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 2.2e-19 99.4 68 70.6
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 2.9e-19 99.0 67 71.6
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 2.9e-19 99.0 66 72.7
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 3.8e-19 98.6 67 68.7
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 3.8e-19 98.6 72 68.1
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 4.9e-19 98.2 72 69.4
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 1.9e-18 96.3 67 70.1
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 2.5e-18 95.9 67 71.6
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 3.2e-18 95.5 81 59.3
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 5.5e-18 94.7 67 67.2
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 2.7e-17 92.4 83 56.6
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 3.5e-17 92.0 62 79.0
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 6.0e-17 91.3 66 71.2
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 1.0e-16 90.5 83 54.2
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.3e-16 90.1 84 58.3
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 1.3e-16 90.1 83 57.8
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 1.3e-16 90.1 67 62.7
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 3.0e-16 89.0 84 57.1
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 3.0e-16 89.0 84 57.1
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 3.9e-16 88.6 84 54.8
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 8.7e-16 87.4 89 53.9
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 1.9e-15 86.3 66 59.1
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 2.5e-15 85.9 68 61.8
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 2.5e-15 85.9 64 68.8
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 5.7e-15 84.7 68 60.3
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 6.3e-14 81.3 66 59.1
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 2.4e-13 79.3 73 57.5
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 3.1e-13 79.0 54 72.2
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 3.1e-13 79.0 98 51.0
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 9.0e-13 77.4 46 82.6
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 1.2e-12 77.0 67 56.7
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 1.5e-12 76.6 67 56.7
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 2.0e-12 76.3 63 63.5
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 6.5e-11 71.2 65 52.3
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 6.7e-08 61.2 43 74.4


User provided reference genes

Program Settings