Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g022410 Solanum pennellii HOM05D021492 ORTHO05D022867 4.2e-52 207.6 96 100.0
Sopen08g009990 Solanum pennellii HOM05D021492 ORTHO05D022867 1.8e-26 122.5 97 63.9
Lj1g0023380 Lotus japonicus HOM05D021492 ORTHO05D022867 1.0e-21 106.7 76 68.4
TWI79G1345 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.2e-14 83.2 60 61.7
TWI74G1678 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.7e-14 82.0 75 52.0
Lj8C456G3 Lonicera japonica HOM05D000107 ORTHO05D000062 1.2e-09 66.6 68 44.1
Ah.08g223240 Amaranthus hybridus HOM05D000107 ORTHO05D000062 3.4e-09 65.1 77 42.9
HanXRQChr09g0257551 Helianthus annuus HOM05D000187 ORTHO05D003213 5.8e-09 64.3 75 41.3
HanXRQChr05g0153531 Helianthus annuus HOM05D000107 ORTHO05D000062 1.3e-08 63.2 75 40.0
Ah.14g079590 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.7e-08 62.8 65 47.7
Atru.chr1.497 Acer truncatum HOM05D000107 ORTHO05D000062 2.2e-08 62.4 67 44.8
Atru.chr5.1751 Acer truncatum HOM05D000107 ORTHO05D000062 2.2e-08 62.4 67 44.8
Ah.13g068990 Amaranthus hybridus HOM05D000107 ORTHO05D003213 2.2e-08 62.4 78 42.3
CANSAT64G1673 Cannabis sativa HOM05D000107 ORTHO05D000062 2.9e-08 62.0 68 41.2
CANSAT64G2733 Cannabis sativa HOM05D000107 ORTHO05D000062 2.9e-08 62.0 68 41.2
CANSAT78G1492 Cannabis sativa HOM05D000107 ORTHO05D000062 8.4e-08 60.5 80 37.5
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 1.1e-07 60.1 80 37.5
PGSC0003DMG400043749 Solanum tuberosum HOM05D000107 ORTHO05D014265 1.1e-07 60.1 75 37.3
TWI15G0534 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-07 60.1 67 38.8
TAR110G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 1.1e-07 60.1 63 46.0
Lalb_Chr20g0115001 Lupinus albus HOM05D000107 ORTHO05D000062 1.4e-07 59.7 80 38.8
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-07 59.3 60 46.7
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-07 59.3 60 46.7
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-07 59.3 60 46.7
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 1.9e-07 59.3 67 38.8
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 2.4e-07 58.9 67 38.8
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 2.4e-07 58.9 68 39.7
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-07 58.5 80 41.2
Hma1.2p1_0167F.1_g073940 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 4.2e-07 58.2 63 36.5
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 4.2e-07 58.2 63 39.7
Prupe.1G266000 Prunus persica HOM05D000107 ORTHO05D000062 4.2e-07 58.2 67 40.3
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-07 58.2 67 37.3
Rhsim01G0178900 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-07 58.2 60 41.7
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-07 58.2 67 38.8
Sopen10g018620 Solanum pennellii HOM05D000107 ORTHO05D000062 4.2e-07 58.2 67 38.8
Atru.chr11.445 Acer truncatum HOM05D000107 ORTHO05D000062 5.4e-07 57.8 61 39.3
Atru.chr3.1417 Acer truncatum HOM05D000107 ORTHO05D000062 5.4e-07 57.8 67 38.8
CSS0035542 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.4e-07 57.8 67 37.3
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-07 57.8 64 42.2
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-07 57.8 58 39.7
Rhsim09G0134500 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-07 57.8 58 39.7
Atru.chr13.1787 Acer truncatum HOM05D000107 ORTHO05D003213 7.1e-07 57.4 66 42.4
Atru.chr13.1791 Acer truncatum HOM05D000107 ORTHO05D003213 7.1e-07 57.4 66 42.4
CSS0006285 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
CSS0013019 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
CSS0020176 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
CSS0020537 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
CSS0022844 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
CSS0033153 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
CSS0034159 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
CSS0036792 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
CSS0038506 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
CSS0043987 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.1e-07 57.4 67 37.3
Sopen02g004720 Solanum pennellii HOM05D000107 ORTHO05D000062 7.1e-07 57.4 60 41.7
Sopen09g019560 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-07 57.4 67 40.3
TAR165G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 7.1e-07 57.4 63 38.1
Rhsim09G0057000 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.3e-07 57.0 79 38.0
AUR62027609 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.2e-06 56.6 72 36.1
AUR62042513 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.2e-06 56.6 72 36.1
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-06 56.6 73 42.5
AUR62025845 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-06 56.2 67 37.3
QL09p027832 Quercus lobata HOM05D000107 ORTHO05D000062 1.6e-06 56.2 70 37.1
Atru.chr10.32 Acer truncatum HOM05D000107 ORTHO05D000062 2.1e-06 55.8 62 37.1
Atru.chr3.2737 Acer truncatum HOM05D000107 ORTHO05D000062 2.1e-06 55.8 62 37.1
CAN.G1057.1 Capsicum annuum HOM05D001730 ORTHO05D003213 2.1e-06 55.8 75 36.0
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 2.1e-06 55.8 60 40.0
TAR709G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000568 2.1e-06 55.8 59 42.4
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 2.7e-06 55.5 81 37.0
Gorai.010G175300 Gossypium raimondii HOM05D000107 ORTHO05D000062 2.7e-06 55.5 63 39.7
Rhsim01G0164300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-06 55.5 58 36.2
Rhsim04G0033300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.7e-06 55.5 58 36.2
Sopen10g026370 Solanum pennellii HOM05D000107 ORTHO05D003213 2.7e-06 55.5 67 41.8
Ah.10g024720 Amaranthus hybridus HOM05D000107 ORTHO05D000062 3.5e-06 55.1 68 39.7
AUR62027664 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.5e-06 55.1 72 34.7
AUR62040356 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.5e-06 55.1 72 37.5
AUR62043742 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.5e-06 55.1 72 34.7
Rhsim05G0124400 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-06 55.1 68 36.8
Rhsim13G0141700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-06 55.1 60 43.3
SHI03580 Sapria himalayana HOM05D000616 ORTHO05D000233 3.5e-06 55.1 84 35.7
TAR097G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 4.6e-06 54.7 64 37.5
Lj1g0007648 Lotus japonicus HOM05D000107 ORTHO05D003213 6.0e-06 54.3 60 40.0
MD03G1146400 Malus domestica HOM05D000107 ORTHO05D000062 6.0e-06 54.3 66 40.9
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.0e-06 54.3 58 36.2
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 6.0e-06 54.3 64 39.1
Ah.11g044790 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.8e-06 53.9 72 41.7
CANSAT54G0700 Cannabis sativa HOM05D000107 ORTHO05D000062 7.8e-06 53.9 60 40.0
CANSAT80G0350 Cannabis sativa HOM05D000107 ORTHO05D000062 7.8e-06 53.9 60 40.0
QL04p020321 Quercus lobata HOM05D000315 ORTHO05D000062 7.8e-06 53.9 65 38.5
QL05p055903 Quercus lobata HOM05D000240 ORTHO05D003213 7.8e-06 53.9 68 36.8
Rhsim05G0024300 Rhododendron simsii HOM05D005012 ORTHO05D005886 7.8e-06 53.9 60 38.3
Rhsim05G0034600 Rhododendron simsii HOM05D005012 ORTHO05D005886 7.8e-06 53.9 60 38.3
Sopen08g011050 Solanum pennellii HOM05D000107 ORTHO05D000062 7.8e-06 53.9 60 41.7


User provided reference genes

Program Settings