Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g021530 Solanum pennellii HOM05D009941 ORTHO05D012025 2.3e-90 335.5 163 100.0
Solyc08g067560.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 2.8e-64 248.8 129 93.0
Sopen08g021500 Solanum pennellii HOM05D009941 ORTHO05D012025 1.1e-63 246.9 123 96.7
Solyc12g017620.1 Solanum lycopersicum HOM05D009941 ORTHO05D012025 7.2e-60 234.2 123 92.7
Solyc08g067580.3 Solanum lycopersicum HOM05D009941 ORTHO05D012025 9.4e-60 233.8 122 91.8
PGSC0003DMG400002263 Solanum tuberosum HOM05D009941 ORTHO05D012025 3.3e-57 225.3 122 89.3
PGSC0003DMG400002264 Solanum tuberosum HOM05D009941 ORTHO05D012025 7.0e-55 217.6 122 84.4
PGSC0003DMG400002256 Solanum tuberosum HOM05D009941 ORTHO05D012025 5.2e-50 201.4 122 78.7
Solyc08g066780.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 5.3e-47 191.4 146 68.5
PGSC0003DMG400002257 Solanum tuberosum HOM05D009941 ORTHO05D012025 2.0e-46 189.5 122 74.6
Solyc08g067600.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 1.3e-45 186.8 131 74.8
PGSC0003DMG400037004 Solanum tuberosum HOM05D009941 ORTHO05D012025 1.8e-42 176.4 122 70.5
Nitab4.5_0002140g0010 Nicotiana tabacum HOM05D009941 ORTHO05D012025 2.7e-38 162.5 122 68.0
Cc11_g01580 Coffea canephora HOM05D009941 ORTHO05D012025 7.8e-22 107.8 129 45.0
Cc11_g01570 Coffea canephora HOM05D009941 ORTHO05D012025 8.9e-18 94.4 121 40.5
Sopen12g008360 Solanum pennellii HOM05D009941 ORTHO05D012025 1.2e-17 94.0 45 93.3
Cc11_g01590 Coffea canephora HOM05D009941 ORTHO05D012025 1.5e-17 93.6 121 39.7
Dinv11600 Davidia involucrata HOM05D009941 ORTHO05D012025 5.4e-15 85.1 113 41.6
Manes.16G117801 Manihot esculenta HOM05D009941 ORTHO05D012025 5.4e-15 85.1 119 38.7
Manes.16G117901 Manihot esculenta HOM05D009941 ORTHO05D012025 1.2e-14 84.0 123 43.1
Actinidia15701 Actinidia chinensis HOM05D009941 ORTHO05D012025 3.5e-14 82.4 122 38.5
Lsat_1_v5_gn_1_45361 Lactuca sativa HOM05D009941 ORTHO05D012025 3.0e-13 79.3 124 37.1
Rhsim10G0024300 Rhododendron simsii HOM05D009941 ORTHO05D012025 1.1e-12 77.4 112 38.4
Rhsim10G0024400 Rhododendron simsii HOM05D009941 ORTHO05D012025 1.1e-12 77.4 112 38.4


User provided reference genes

Program Settings