Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g021500 Solanum pennellii HOM05D009941 ORTHO05D012025 1.9e-68 262.3 125 100.0
Solyc08g067560.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 1.3e-64 249.6 124 96.8
Sopen08g021530 Solanum pennellii HOM05D009941 ORTHO05D012025 6.3e-64 247.3 123 96.7
Solyc12g017620.1 Solanum lycopersicum HOM05D009941 ORTHO05D012025 1.5e-62 242.7 125 93.6
Solyc08g067580.3 Solanum lycopersicum HOM05D009941 ORTHO05D012025 3.8e-61 238.0 125 92.0
PGSC0003DMG400002263 Solanum tuberosum HOM05D009941 ORTHO05D012025 6.7e-58 227.3 125 88.8
PGSC0003DMG400002264 Solanum tuberosum HOM05D009941 ORTHO05D012025 2.2e-56 222.2 125 84.8
PGSC0003DMG400002256 Solanum tuberosum HOM05D009941 ORTHO05D012025 1.6e-51 206.1 125 79.2
PGSC0003DMG400002257 Solanum tuberosum HOM05D009941 ORTHO05D012025 8.2e-48 193.7 125 75.2
Solyc08g066780.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 2.0e-46 189.1 125 77.6
Solyc08g067600.2 Solanum lycopersicum HOM05D009941 ORTHO05D012025 2.9e-45 185.3 126 77.8
PGSC0003DMG400037004 Solanum tuberosum HOM05D009941 ORTHO05D012025 8.5e-45 183.7 125 72.0
Nitab4.5_0002140g0010 Nicotiana tabacum HOM05D009941 ORTHO05D012025 8.3e-40 167.2 124 68.5
Cc11_g01580 Coffea canephora HOM05D009941 ORTHO05D012025 6.0e-22 107.8 124 46.0
Cc11_g01570 Coffea canephora HOM05D009941 ORTHO05D012025 8.9e-18 94.0 124 40.3
Cc11_g01590 Coffea canephora HOM05D009941 ORTHO05D012025 2.0e-17 92.8 124 38.7
Sopen12g008360 Solanum pennellii HOM05D009941 ORTHO05D012025 4.4e-17 91.7 45 91.1
Manes.16G117901 Manihot esculenta HOM05D009941 ORTHO05D012025 5.4e-15 84.7 124 42.7
Manes.16G117801 Manihot esculenta HOM05D009941 ORTHO05D012025 2.1e-14 82.8 120 37.5
Actinidia15701 Actinidia chinensis HOM05D009941 ORTHO05D012025 4.6e-14 81.6 125 37.6
Dinv11600 Davidia involucrata HOM05D009941 ORTHO05D012025 4.6e-14 81.6 114 40.4
Lsat_1_v5_gn_1_45361 Lactuca sativa HOM05D009941 ORTHO05D012025 1.9e-12 76.3 118 36.4
Rhsim10G0024300 Rhododendron simsii HOM05D009941 ORTHO05D012025 9.5e-12 73.9 113 37.2
Rhsim10G0024400 Rhododendron simsii HOM05D009941 ORTHO05D012025 9.5e-12 73.9 113 37.2


User provided reference genes

Program Settings