Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 8.1e-54 213.4 101 100.0
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 1.9e-50 202.2 101 95.0
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 6.0e-49 197.2 101 92.1
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 3.0e-40 168.3 101 83.2
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.8e-37 159.1 101 80.2
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.7e-35 152.5 101 76.2
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 1.6e-30 136.0 109 58.7
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 1.4e-29 132.9 104 61.5
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.8e-29 132.5 102 61.8
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 2.4e-29 132.1 104 59.6
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 1.2e-28 129.8 104 57.7
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.2e-28 129.8 104 60.6
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 4.5e-28 127.9 103 59.2
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 7.7e-28 127.1 104 58.7
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 1.0e-27 126.7 93 67.7
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.0e-27 126.7 106 58.5
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 1.0e-27 126.7 107 57.9
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 1.0e-27 126.7 104 57.7
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.3e-27 126.3 104 56.7
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 1.3e-27 126.3 105 59.0
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 1.7e-27 125.9 70 72.9
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 1.7e-27 125.9 98 62.2
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 2.9e-27 125.2 100 60.0
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 5.0e-27 124.4 110 55.5
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 6.5e-27 124.0 96 59.4
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 8.5e-27 123.6 101 58.4
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 1.4e-26 122.9 104 56.7
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 1.4e-26 122.9 101 55.4
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 2.5e-26 122.1 58 84.5
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.5e-26 122.1 103 61.2
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 2.5e-26 122.1 57 87.7
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 4.2e-26 121.3 103 57.3
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.2e-26 121.3 103 58.3
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 4.2e-26 121.3 103 58.3
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 4.2e-26 121.3 103 59.2
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 4.2e-26 121.3 106 55.7
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 5.5e-26 120.9 103 58.3
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 7.2e-26 120.6 103 60.2
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 9.4e-26 120.2 75 72.0
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 9.4e-26 120.2 110 54.5
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 9.4e-26 120.2 81 64.2
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.6e-25 119.4 104 55.8
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.1e-25 119.0 103 59.2
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 2.7e-25 118.6 97 61.9
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 2.7e-25 118.6 104 52.9
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 2.7e-25 118.6 100 60.0
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 3.6e-25 118.2 110 53.6
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 4.6e-25 117.9 102 57.8
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 4.6e-25 117.9 53 92.5
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 6.1e-25 117.5 75 70.7
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 7.9e-25 117.1 102 52.0
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.0e-24 116.7 61 80.3
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.4e-24 116.3 107 51.4
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 1.4e-24 116.3 110 52.7
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.4e-24 116.3 110 52.7
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.4e-24 116.3 110 52.7
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.4e-24 116.3 104 55.8
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.4e-24 116.3 104 52.9
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.8e-24 115.9 104 55.8
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 2.3e-24 115.5 108 54.6
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 3.0e-24 115.2 108 53.7
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 3.9e-24 114.8 105 57.1
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 5.1e-24 114.4 100 56.0
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 5.1e-24 114.4 110 51.8
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 6.7e-24 114.0 110 54.5
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 6.7e-24 114.0 72 66.7
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 6.7e-24 114.0 104 50.0
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 8.8e-24 113.6 95 57.9
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 1.1e-23 113.2 104 58.7
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 1.1e-23 113.2 110 51.8
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 1.1e-23 113.2 105 58.1
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 1.5e-23 112.8 85 64.7
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 2.0e-23 112.5 102 53.9
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 2.0e-23 112.5 105 56.2
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 2.5e-23 112.1 59 81.4
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 3.3e-23 111.7 82 61.0
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 4.3e-23 111.3 85 61.2
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 5.7e-23 110.9 100 58.0
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 7.4e-23 110.5 97 56.7
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 1.7e-22 109.4 97 54.6
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 1.7e-22 109.4 97 57.7
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 1.7e-22 109.4 68 72.1
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 2.2e-22 109.0 67 65.7
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 2.2e-22 109.0 53 84.9
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 4.8e-22 107.8 55 80.0
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 8.2e-22 107.1 50 88.0
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 8.2e-22 107.1 50 88.0
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 8.2e-22 107.1 50 88.0
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 8.2e-22 107.1 50 88.0
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 8.2e-22 107.1 50 88.0
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 8.2e-22 107.1 50 88.0
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 8.2e-22 107.1 96 56.2
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 8.2e-22 107.1 102 50.0
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 8.2e-22 107.1 50 88.0
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 1.1e-21 106.7 100 55.0
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 1.4e-21 106.3 108 52.8
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 1.4e-21 106.3 108 52.8
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 1.4e-21 106.3 108 52.8
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 1.8e-21 105.9 50 86.0
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 4.1e-21 104.8 100 54.0
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 6.9e-21 104.0 62 69.4
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 9.1e-21 103.6 62 69.4
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 1.5e-20 102.8 98 53.1
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 2.0e-20 102.4 58 72.4
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 2.0e-20 102.4 99 53.5
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 2.6e-20 102.1 95 53.7
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 4.5e-20 101.3 103 49.5
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 5.9e-20 100.9 97 54.6
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 1.3e-19 99.8 47 80.9
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 2.9e-19 98.6 112 47.3
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 6.5e-19 97.4 105 47.6
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 3.2e-18 95.1 96 44.8
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 1.4e-16 89.7 46 76.1
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 2.6e-15 85.5 106 41.5
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 1.7e-14 82.8 49 61.2
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 3.7e-14 81.6 55 58.2


User provided reference genes

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