Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g018720 Solanum pennellii HOM05D000009 ORTHO05D000008 1.5e-30 135.6 70 100.0
Solyc11g072000.2 Solanum lycopersicum HOM05D000009 ORTHO05D000008 3.3e-22 107.8 65 81.5
Sopen11g029100 Solanum pennellii HOM05D000009 ORTHO05D000008 3.3e-22 107.8 65 81.5
PGSC0003DMG401027402 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.4e-22 106.7 65 81.5
PGSC0003DMG402027402 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.4e-22 106.7 65 81.5
CAN.G1887.3 Capsicum annuum HOM05D000009 ORTHO05D000008 1.7e-21 105.5 65 81.5
PGSC0003DMG402018576 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.7e-21 105.5 65 80.0
CAN.G1848.4 Capsicum annuum HOM05D000009 ORTHO05D000008 1.1e-20 102.8 65 80.0
CAN.G1848.5 Capsicum annuum HOM05D000009 ORTHO05D000008 1.1e-20 102.8 65 80.0
Sopen11g030120 Solanum pennellii HOM05D000009 ORTHO05D000008 3.1e-20 101.3 65 78.5
CAN.G309.43 Capsicum annuum HOM05D000009 ORTHO05D000008 4.1e-20 100.9 65 78.5
Solyc08g007630.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 6.9e-20 100.1 65 76.9
CAN.G1358.6 Capsicum annuum HOM05D000009 ORTHO05D000008 9.1e-20 99.8 65 76.9
PGSC0003DMG400018693 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.2e-19 99.4 65 75.4
CAN.G309.40 Capsicum annuum HOM05D000009 ORTHO05D000008 2.0e-19 98.6 65 75.4
Sopen08g003590 Solanum pennellii HOM05D000009 ORTHO05D000008 2.0e-19 98.6 65 75.4
PGSC0003DMG401018696 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.0e-19 98.6 65 75.4
CAN.G309.27 Capsicum annuum HOM05D000009 ORTHO05D000008 2.6e-19 98.2 65 75.4
PGSC0003DMG400007344 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.6e-19 98.2 65 76.9
Nitab4.5_0000227g0330 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.4e-19 97.8 64 78.1
CAN.G309.31 Capsicum annuum HOM05D000009 ORTHO05D000008 7.7e-19 96.7 65 76.9
CAN.G631.62 Capsicum annuum HOM05D000009 ORTHO05D000008 7.7e-19 96.7 65 73.8
Nitab4.5_0005589g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.7e-19 96.7 65 75.4
Nitab4.5_0006572g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.7e-19 96.7 65 75.4
PGSC0003DMG400014047 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.7e-19 96.7 65 75.4
Nitab4.5_0011718g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.0e-18 96.3 64 75.0
Sopen11g025550 Solanum pennellii HOM05D000009 ORTHO05D000008 1.0e-18 96.3 65 75.4
CAN.G1632.11 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-18 95.9 65 72.3
CAN.G1848.3 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-18 95.9 65 76.9
Sopen11g027000 Solanum pennellii HOM05D000009 ORTHO05D000008 1.3e-18 95.9 65 73.8
PGSC0003DMG401018576 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.3e-18 95.9 65 73.8
CAN.G742.15 Capsicum annuum HOM05D000009 ORTHO05D000008 1.7e-18 95.5 64 75.0
PGSC0003DMG400019667 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.7e-18 95.5 65 75.4
CAN.G2377.1 Capsicum annuum HOM05D000009 ORTHO05D000008 2.2e-18 95.1 65 72.3
CAN.G3750.2 Capsicum annuum HOM05D000009 ORTHO05D000008 2.2e-18 95.1 65 72.3
Peaxi162Scf00152g01127 Petunia axillaris HOM05D000009 ORTHO05D000008 2.2e-18 95.1 65 75.4
Sopen11g028360 Solanum pennellii HOM05D000009 ORTHO05D000008 2.9e-18 94.7 65 70.8
PGSC0003DMG400027407 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.9e-18 94.7 64 75.0
CAN.G631.55 Capsicum annuum HOM05D000009 ORTHO05D000008 3.8e-18 94.4 65 72.3
Nitab4.5_0004261g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.8e-18 94.4 64 73.4
Nitab4.5_0005589g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.8e-18 94.4 64 76.6
Nitab4.5_0010433g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.0e-18 94.0 64 73.4
Nitab4.5_0010845g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.0e-18 94.0 64 75.0
Sopen11g029660 Solanum pennellii HOM05D000009 ORTHO05D000008 5.0e-18 94.0 65 72.3
Nitab4.5_0000227g0100 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.5e-18 93.6 64 75.0
Solyc11g071420.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 6.5e-18 93.6 65 70.8
Sopen11g024570 Solanum pennellii HOM05D000009 ORTHO05D000008 6.5e-18 93.6 64 71.9
CAN.G553.4 Capsicum annuum HOM05D000009 ORTHO05D000008 8.5e-18 93.2 65 72.3
Sopen11g027060 Solanum pennellii HOM05D000009 ORTHO05D000008 8.5e-18 93.2 65 72.3
Peaxi162Scf01048g00002 Petunia axillaris HOM05D000009 ORTHO05D000008 1.4e-17 92.4 65 72.3
Nitab4.5_0000227g0380 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.5e-17 91.7 64 71.9
Nitab4.5_0001107g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.5e-17 91.7 64 73.4
Nitab4.5_0005589g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.5e-17 91.7 65 72.3
Nitab4.5_0009634g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.5e-17 91.7 66 71.2
Peaxi162Scf00773g00123 Petunia axillaris HOM05D000009 ORTHO05D000008 2.5e-17 91.7 65 70.8
Nitab4.5_0002914g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.2e-17 91.3 64 73.4
Peaxi162Scf01090g00130 Petunia axillaris HOM05D000009 ORTHO05D000008 3.2e-17 91.3 64 73.4
Sopen11g029090 Solanum pennellii HOM05D000009 ORTHO05D000008 3.2e-17 91.3 65 69.2
Nitab4.5_0000023g0540 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.2e-17 90.9 66 74.2
Solyc11g064770.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 5.5e-17 90.5 64 68.8
CAN.G1149.5 Capsicum annuum HOM05D000009 ORTHO05D000008 7.2e-17 90.1 65 70.8
Nitab4.5_0000075g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.2e-17 90.1 65 70.8
Nitab4.5_0000890g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.2e-17 90.1 65 70.8
Nitab4.5_0002355g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.2e-17 90.1 65 70.8
Nitab4.5_0006572g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.2e-17 90.1 65 67.7
Sopen11g020860 Solanum pennellii HOM05D000009 ORTHO05D000008 7.2e-17 90.1 65 69.2
PGSC0003DMG400002980 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.2e-16 89.4 59 76.3
Nitab4.5_0000613g0070 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.6e-16 89.0 65 67.7
Nitab4.5_0005589g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.6e-16 89.0 65 67.7
Nitab4.5_0011718g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.6e-16 89.0 65 69.2
Nitab4.5_0014415g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.6e-16 89.0 65 67.7
Peaxi162Scf03969g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 1.6e-16 89.0 65 66.2
Solyc11g069620.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.1e-16 88.6 65 66.2
CAN.G553.7 Capsicum annuum HOM05D000009 ORTHO05D000008 4.7e-16 87.4 65 73.8
Nitab4.5_0003550g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.7e-16 87.4 63 68.3
Sopen11g028330 Solanum pennellii HOM05D000009 ORTHO05D000008 4.7e-16 87.4 65 64.6
PGSC0003DMG400018720 Solanum tuberosum HOM05D000009 ORTHO05D000008 8.0e-16 86.7 65 67.7
Peaxi162Scf00637g00221 Petunia axillaris HOM05D000009 ORTHO05D000008 1.4e-15 85.9 65 64.6
Peaxi162Scf00857g00009 Petunia axillaris HOM05D000009 ORTHO05D000008 1.4e-15 85.9 63 66.7
Peaxi162Scf03637g00004 Petunia axillaris HOM05D000009 ORTHO05D000008 1.4e-15 85.9 65 64.6
CAN.G1524.11 Capsicum annuum HOM05D000009 ORTHO05D000008 1.8e-15 85.5 77 61.0
Nitab4.5_0000023g0520 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.3e-15 85.1 64 65.6
Sopen11g028610 Solanum pennellii HOM05D000009 ORTHO05D000008 2.3e-15 85.1 65 64.6
CAN.G1647.4 Capsicum annuum HOM05D000009 ORTHO05D000008 3.0e-15 84.7 64 67.2
Peaxi162Scf00637g00219 Petunia axillaris HOM05D000009 ORTHO05D000008 5.2e-15 84.0 65 64.6
Peaxi162Scf00757g00423 Petunia axillaris HOM05D000009 ORTHO05D000008 5.2e-15 84.0 65 64.6
Peaxi162Scf00757g00425 Petunia axillaris HOM05D000009 ORTHO05D000008 5.2e-15 84.0 65 64.6
Peaxi162Scf54193g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 5.2e-15 84.0 65 64.6
Sopen09g016280 Solanum pennellii HOM05D000009 ORTHO05D000008 1.1e-14 82.8 65 64.6
PGSC0003DMG400019669 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.1e-14 82.8 65 64.6
CAN.G1149.3 Capsicum annuum HOM05D000009 ORTHO05D000008 1.5e-14 82.4 65 67.7
Solyc11g068360.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.5e-14 82.4 65 63.1
CAN.G1524.10 Capsicum annuum HOM05D000009 ORTHO05D000008 3.3e-14 81.3 65 66.2
CAN.G963.10 Capsicum annuum HOM05D000009 ORTHO05D000008 2.2e-13 78.6 65 63.1
CAN.G1632.8 Capsicum annuum HOM05D000009 ORTHO05D000008 8.2e-13 76.6 65 63.1
Nitab4.5_0000013g0530 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.0e-11 72.0 48 70.8
CAN.G1524.13 Capsicum annuum HOM05D000009 ORTHO05D000008 3.5e-11 71.2 65 61.5
CAN.G1632.4 Capsicum annuum HOM05D000009 ORTHO05D000008 3.5e-11 71.2 65 58.5
Nitab4.5_0000762g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.5e-11 71.2 68 52.9
CAN.G1358.2 Capsicum annuum HOM05D000009 ORTHO05D000008 7.7e-11 70.1 65 63.1
CAN.G525.34 Capsicum annuum HOM05D000009 ORTHO05D000008 3.8e-10 67.8 65 63.1
CAN.G182.10 Capsicum annuum HOM05D000009 ORTHO05D000008 1.5e-09 65.9 65 60.0
CAN.G309.26 Capsicum annuum HOM05D000009 ORTHO05D000008 4.2e-09 64.3 64 57.8
CAN.G631.59 Capsicum annuum HOM05D000473 ORTHO05D001219 7.2e-09 63.5 64 60.9
Peaxi162Scf00071g00945 Petunia axillaris HOM05D000009 ORTHO05D000008 1.2e-08 62.8 64 51.6
Solyc03g078300.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.6e-08 62.4 64 51.6
Sopen03g021050 Solanum pennellii HOM05D000009 ORTHO05D000008 1.6e-08 62.4 64 51.6
PGSC0003DMG400009455 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.7e-08 61.6 65 55.4
PGSC0003DMG400013721 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.7e-08 61.6 64 51.6
Hma1.2p1_0528F.1_g173070 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.1e-08 60.5 64 51.6
vmacro16502 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 6.1e-08 60.5 58 55.2
Hma1.2p1_1026F.1_g249420 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 8.0e-08 60.1 58 55.2
Rhsim07G0059500 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.0e-08 60.1 58 56.9
RhsimUnG0246100 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.0e-08 60.1 58 56.9
CAN.G1887.8 Capsicum annuum HOM05D000473 ORTHO05D000008 1.0e-07 59.7 57 66.7
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 1.4e-07 59.3 58 56.9
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.4e-07 59.3 58 56.9
Peaxi162Scf01285g00005 Petunia axillaris HOM05D000009 ORTHO05D000008 6.7e-07 57.0 64 54.7
Hma1.2p1_1991F.1_g310210 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 8.8e-07 56.6 58 51.7
vmacro13518 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 8.8e-07 56.6 62 51.6
Dinv12555 Davidia involucrata HOM05D000009 ORTHO05D000008 1.5e-06 55.8 58 50.0
Rhsim03G0031500 Rhododendron simsii HOM05D000009 ORTHO05D000008 1.5e-06 55.8 58 53.4
Rhsim10G0049100 Rhododendron simsii HOM05D000009 ORTHO05D000008 1.5e-06 55.8 60 50.0
arahy.Tifrunner.gnm1.ann1.NJ02RL Arachis hypogaea HOM05D000009 ORTHO05D000008 2.6e-06 55.1 58 53.4
arahy.Tifrunner.gnm1.ann1.SV36IN Arachis hypogaea HOM05D000009 ORTHO05D000008 2.6e-06 55.1 58 53.4
Rhsim07G0209800 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.6e-06 55.1 58 56.9
arahy.Tifrunner.gnm1.ann1.4ZR0FI Arachis hypogaea HOM05D000009 ORTHO05D000008 3.3e-06 54.7 58 51.7
Dinv02624 Davidia involucrata HOM05D000009 ORTHO05D000008 3.3e-06 54.7 58 50.0
Dinv25425 Davidia involucrata HOM05D000009 ORTHO05D000008 3.3e-06 54.7 58 50.0
Atru.chr11.2458 Acer truncatum HOM05D000009 ORTHO05D000008 4.4e-06 54.3 61 45.9
arahy.Tifrunner.gnm1.ann1.C72SYV Arachis hypogaea HOM05D000009 ORTHO05D000008 4.4e-06 54.3 58 51.7
Rhsim07G0209500 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.4e-06 54.3 58 56.9
Rhsim07G0209900 Rhododendron simsii HOM05D000009 ORTHO05D000008 4.4e-06 54.3 58 56.9
arahy.Tifrunner.gnm1.ann1.A52RDS Arachis hypogaea HOM05D000009 ORTHO05D000008 5.7e-06 53.9 58 53.4
Cc00_g16760 Coffea canephora HOM05D000009 ORTHO05D000008 5.7e-06 53.9 58 51.7
Hma1.2p1_0938F.1_g239270 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.7e-06 53.9 59 52.5
Solyc11g071430.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 5.7e-06 53.9 34 76.5
Hma1.2p1_0573F.1_g181330 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.5e-06 53.5 58 51.7
Hma1.2p1_0573F.1_g181340 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.5e-06 53.5 58 51.7
Rhsim07G0209600 Rhododendron simsii HOM05D000009 ORTHO05D000008 7.5e-06 53.5 58 56.9
PGSC0003DMG400027377 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.5e-06 53.5 65 53.8
arahy.Tifrunner.gnm1.ann1.YSI06R Arachis hypogaea HOM05D000009 ORTHO05D000008 9.7e-06 53.1 58 51.7
Gorai.009G311700 Gossypium raimondii HOM05D000009 ORTHO05D000008 9.7e-06 53.1 59 50.8
Hma1.2p1_0839F.1_g226430 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 9.7e-06 53.1 64 48.4
Solyc11g043100.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 9.7e-06 53.1 36 66.7


User provided reference genes

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