Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 8.1e-132 473.8 245 100.0
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 5.1e-110 401.4 245 83.3
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 1.1e-109 400.2 245 83.7
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 4.8e-76 288.5 245 66.9
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 2.5e-72 276.2 234 63.7
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 3.0e-70 269.2 221 62.0
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 3.3e-69 265.8 243 62.1
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 5.7e-69 265.0 242 59.9
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 1.3e-68 263.8 240 63.3
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 8.2e-68 261.2 245 58.4
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 4.1e-67 258.8 248 57.7
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 7.0e-67 258.1 243 58.8
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 7.0e-67 258.1 249 59.4
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 2.0e-66 256.5 237 57.4
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 4.5e-66 255.4 242 60.7
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 7.7e-66 254.6 244 58.6
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 1.0e-65 254.2 245 56.7
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 2.5e-64 249.6 237 58.2
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 3.2e-64 249.2 242 59.5
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 1.2e-63 247.3 246 56.1
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 1.6e-63 246.9 205 63.9
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 2.1e-63 246.5 205 65.9
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 2.7e-63 246.1 194 65.5
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 2.7e-63 246.1 244 60.2
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 3.6e-63 245.7 240 59.2
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 3.6e-63 245.7 207 62.8
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 8.0e-63 244.6 242 56.6
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.8e-62 243.4 242 56.6
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.8e-62 243.4 242 56.6
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 1.8e-62 243.4 184 65.2
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 2.3e-62 243.0 176 71.0
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 3.0e-62 242.7 212 60.8
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 5.2e-62 241.9 205 63.4
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 5.2e-62 241.9 193 65.8
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 6.8e-62 241.5 205 65.4
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 8.8e-62 241.1 228 57.5
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 8.8e-62 241.1 243 57.2
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 2.0e-61 240.0 237 56.5
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 2.6e-61 239.6 204 63.7
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 7.5e-61 238.0 240 57.5
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 7.5e-61 238.0 195 63.6
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 7.5e-61 238.0 174 69.0
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 9.8e-61 237.7 248 56.9
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 9.8e-61 237.7 195 64.1
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 1.7e-60 236.9 201 61.2
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 3.7e-60 235.7 292 50.0
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 3.7e-60 235.7 196 62.8
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 1.4e-59 233.8 242 57.0
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 1.8e-59 233.4 212 59.9
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 3.1e-59 232.6 243 56.8
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 7.0e-59 231.5 197 59.9
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 2.0e-58 229.9 221 60.2
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 3.5e-58 229.2 204 58.3
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 1.0e-57 227.6 206 61.7
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 1.0e-57 227.6 197 59.4
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 2.3e-57 226.5 240 52.1
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 5.0e-57 225.3 173 66.5
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 1.1e-56 224.2 244 54.5
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 4.2e-56 222.2 200 59.0
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 5.5e-56 221.9 218 55.0
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 7.2e-56 221.5 220 54.5
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 9.5e-56 221.1 217 54.8
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 9.5e-56 221.1 217 54.8
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 9.5e-56 221.1 217 54.8
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 9.5e-56 221.1 197 61.9
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 1.6e-55 220.3 240 54.6
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 2.1e-55 219.9 221 54.3
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 2.8e-55 219.5 243 53.1
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 8.0e-55 218.0 217 55.3
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 1.0e-54 217.6 250 53.6
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 2.3e-54 216.5 199 58.8
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 4.0e-54 215.7 218 54.1
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 6.8e-54 214.9 240 51.7
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 8.8e-54 214.5 243 52.7
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 1.2e-53 214.2 175 62.9
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 2.0e-53 213.4 215 54.0
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 4.4e-53 212.2 230 54.3
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 2.8e-52 209.5 108 98.1
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 1.1e-51 207.6 210 55.2
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 2.4e-51 206.5 195 57.4
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 3.1e-51 206.1 208 55.8
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 4.1e-51 205.7 193 58.5
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 1.7e-49 200.3 214 52.8
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 6.6e-49 198.4 196 57.1
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 1.1e-48 197.6 177 58.2
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 2.3e-46 189.9 165 60.0
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 1.2e-45 187.6 163 62.0
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 9.8e-45 184.5 174 55.7
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 6.4e-44 181.8 162 59.3
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 7.0e-43 178.3 151 58.3
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 2.7e-42 176.4 136 66.2
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 3.9e-41 172.6 145 59.3
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 2.1e-39 166.8 204 48.5
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 5.2e-38 162.2 154 56.5
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 2.4e-35 153.3 153 53.6
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 3.5e-34 149.4 211 41.2
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 3.3e-32 142.9 361 33.8
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 3.6e-31 139.4 105 70.5
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 3.1e-30 136.3 105 68.6
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 3.1e-30 136.3 105 68.6
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 3.2e-27 126.3 162 42.0
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 3.2e-19 99.8 172 37.8
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 1.1e-14 84.7 62 69.4
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 1.0e-09 68.2 156 31.4


User provided reference genes

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