Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 1.1e-90 336.7 176 100.0
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 2.7e-89 332.0 176 98.9
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 2.6e-87 325.5 176 96.6
Nitab4.5_0000446g0120 Nicotiana tabacum HOM05D007692 ORTHO05D009696 5.2e-80 301.2 178 89.3
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 1.5e-79 299.7 178 88.2
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 7.5e-79 297.4 175 89.7
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 1.1e-77 293.5 175 87.4
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 1.1e-34 150.6 176 49.4
COL.COLO4_21142 Corchorus olitorius HOM05D007692 ORTHO05D009696 1.8e-32 143.3 173 47.4
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 2.4e-32 142.9 190 47.9
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 3.1e-32 142.5 192 49.5
Hma1.2p1_0278F.1_g111850 Hydrangea macrophylla HOM05D007692 ORTHO05D009696 2.6e-31 139.4 108 66.7
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 2.6e-31 139.4 171 46.2
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 1.9e-29 133.3 106 66.0
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 7.8e-28 127.9 111 59.5
Haze_18297 Corylus avellana HOM05D007692 ORTHO05D009696 1.7e-27 126.7 101 67.3
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 2.3e-27 126.3 98 62.2
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 5.1e-27 125.2 111 59.5
SalBow4G0926 Salvia bowleyana HOM05D007692 ORTHO05D009696 5.1e-27 125.2 104 56.7
Oeu003971.1 Olea europaea HOM05D007692 ORTHO05D009696 8.7e-27 124.4 100 61.0
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 8.7e-27 124.4 101 64.4
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 4.3e-26 122.1 110 58.2
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 4.3e-26 122.1 109 58.7
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 5.6e-26 121.7 97 62.9
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 7.3e-26 121.3 111 58.6
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 9.6e-26 120.9 111 57.7
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 1.6e-25 120.2 101 58.4
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 2.1e-25 119.8 96 66.7
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 2.1e-25 119.8 93 61.3
CSS0041722 Camellia sinensis var. sinensis HOM05D007692 ORTHO05D009696 6.2e-25 118.2 89 64.0
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 1.1e-24 117.5 101 58.4
Gohir.D05G040100 Gossypium hirsutum HOM05D007692 ORTHO05D009696 1.4e-24 117.1 171 43.9
Gorai.009G040500 Gossypium raimondii HOM05D007692 ORTHO05D009696 1.4e-24 117.1 171 43.9
EL10Ac2g03778 Beta vulgaris HOM05D007692 ORTHO05D009696 2.4e-24 116.3 102 59.8
Gohir.A05G038600 Gossypium hirsutum HOM05D007692 ORTHO05D009696 5.2e-24 115.2 171 44.4
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 5.2e-24 115.2 97 56.7
Cfa017868 Carpinus fangiana HOM05D007692 ORTHO05D009696 9.0e-24 114.4 101 62.4
CiPaw.15G091700 Carya illinoinensis HOM05D007692 ORTHO05D009696 2.0e-23 113.2 112 51.8
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 7.6e-23 111.3 102 59.8
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 7.6e-23 111.3 102 59.8
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 1.3e-22 110.5 99 62.6
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 1.7e-22 110.2 111 55.0
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 2.9e-22 109.4 98 56.1
Eucgr.C00729 Eucalyptus grandis HOM05D007692 ORTHO05D009696 2.9e-22 109.4 108 53.7
Glyma.17G225900 Glycine max HOM05D007692 ORTHO05D009696 6.4e-22 108.2 110 54.5
THA.LOC104810956 Tarenaya hassleriana HOM05D007692 ORTHO05D009696 1.1e-21 107.5 110 49.1
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 1.9e-21 106.7 93 52.7
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 3.2e-21 105.9 105 54.3
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 7.1e-21 104.8 111 54.1
PSO541G2080 Papaver somniferum HOM05D007692 ORTHO05D009696 2.1e-20 103.2 103 51.5
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-20 102.8 109 55.0
Lsat_1_v5_gn_7_58320 Lactuca sativa HOM05D006390 ORTHO05D007899 2.7e-20 102.8 98 56.1
Sc06g0001120 Simmondsia chinensis HOM05D007692 ORTHO05D009696 2.7e-20 102.8 97 53.6
Lj5g0021751 Lotus japonicus HOM05D007692 ORTHO05D009696 4.6e-20 102.1 110 51.8
Medtr1g015470 Medicago truncatula HOM05D007692 ORTHO05D009696 4.6e-20 102.1 100 51.0
Glyma.06G056100 Glycine max HOM05D007692 ORTHO05D009696 6.0e-20 101.7 101 53.5
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 6.0e-20 101.7 104 48.1
arahy.Tifrunner.gnm1.ann1.0E4SK3 Arachis hypogaea HOM05D007692 ORTHO05D009696 7.8e-20 101.3 101 52.5
Psat6g022960 Pisum sativum HOM05D007692 ORTHO05D009696 1.0e-19 100.9 101 50.5
PSO675G1902 Papaver somniferum HOM05D007692 ORTHO05D009696 1.3e-19 100.5 103 51.5
TPR.G38893 Trifolium pratense HOM05D007692 ORTHO05D009696 2.3e-19 99.8 110 46.4
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 3.0e-19 99.4 102 53.9
VMungo1309G1304 Vigna mungo HOM05D007692 ORTHO05D009696 3.9e-19 99.0 101 51.5
Cc08_g01120 Coffea canephora HOM05D007692 ORTHO05D009696 1.1e-18 97.4 101 52.5
A10p18810 Brassica napus HOM05D007692 ORTHO05D009696 1.5e-18 97.1 101 51.5
C09p54830 Brassica napus HOM05D007692 ORTHO05D009696 1.5e-18 97.1 101 51.5
BolC9t58343H Brassica oleracea HOM05D007692 ORTHO05D009696 1.5e-18 97.1 101 51.5
BraA10t43961Z Brassica rapa HOM05D007692 ORTHO05D009696 1.5e-18 97.1 101 51.5
TPR.G3568 Trifolium pratense HOM05D007692 ORTHO05D009696 1.5e-18 97.1 112 45.5
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 2.5e-18 96.3 101 51.5
Phvul.009G082200 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 3.3e-18 95.9 110 48.2
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 5.6e-18 95.1 93 54.8
Ah.11g044290 Amaranthus hybridus HOM05D007692 ORTHO05D009696 7.3e-18 94.7 110 48.2
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 9.6e-18 94.4 101 53.5
Phvul.001G038600 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 2.8e-17 92.8 92 54.3
Thhalv10015977m.g Eutrema salsugineum HOM05D007692 ORTHO05D009696 6.2e-17 91.7 101 48.5
HanXRQChr03g0065641 Helianthus annuus HOM05D007692 ORTHO05D009696 1.1e-16 90.9 106 50.0
ATR0598G206 Amborella trichopoda HOM05D007692 ORTHO05D009696 1.8e-16 90.1 94 52.1
CARHR191630 Cardamine hirsuta HOM05D007692 ORTHO05D009696 1.8e-16 90.1 95 50.5
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 3.1e-16 89.4 101 46.5
Psat5g030520 Pisum sativum HOM05D007692 ORTHO05D009696 5.3e-16 88.6 94 51.1
Medtr3g105090 Medicago truncatula HOM05D007692 ORTHO05D009696 2.0e-15 86.7 111 42.3
Aqoxy2G03896 Aquilegia oxysepala HOM05D007692 ORTHO05D009696 2.6e-15 86.3 104 44.2
CDE04G2134 Ceratophyllum demersum HOM05D007692 ORTHO05D009696 2.6e-15 86.3 114 47.4
Lalb_Chr11g0063341 Lupinus albus HOM05D007692 ORTHO05D009696 9.9e-15 84.3 110 43.6
Medtr1g015490 Medicago truncatula HOM05D007692 ORTHO05D009696 3.8e-14 82.4 111 40.5
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 2.4e-13 79.7 100 44.0
Sp6g23280 Schrenkiella parvula HOM05D007692 ORTHO05D009696 9.3e-13 77.8 93 45.2
Carub.0006s1955 Capsella rubella HOM05D007692 ORTHO05D009696 1.6e-12 77.0 107 43.0
AT5G21910 Arabidopsis thaliana HOM05D007692 ORTHO05D009696 3.5e-12 75.9 107 43.0
Psat6g004480 Pisum sativum HOM05D007692 ORTHO05D009696 1.1e-10 70.9 67 52.2
Atru.chr7.1844 Acer truncatum HOM05D007692 ORTHO05D009696 2.5e-10 69.7 68 57.4
Carub.0005s0963 Capsella rubella HOM05D007692 ORTHO05D009696 2.5e-10 69.7 94 42.6
Lj1g0020593 Lotus japonicus HOM05D007692 ORTHO05D009696 2.5e-10 69.7 111 39.6
Duzib150G0238 Durio zibethinus HOM05D007692 ORTHO05D009696 2.1e-09 66.6 123 39.8
Lalb_Chr14g0366461 Lupinus albus HOM05D007692 ORTHO05D009696 3.7e-09 65.9 78 44.9
TAR624G1426 Trochodendron aralioides HOM05D000001 ORTHO05D000003 2.4e-08 63.2 63 46.0
Sed0007062 Sechium edule HOM05D007692 ORTHO05D009696 2.2e-06 56.6 48 58.3


User provided reference genes

Program Settings