Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g016850 Solanum pennellii HOM05D008648 ORTHO05D010855 2.8e-67 258.5 129 100.0
Sopen05g014010 Solanum pennellii HOM05D008648 ORTHO05D010855 6.5e-56 220.7 129 89.1
Sopen12g007370 Solanum pennellii HOM05D008648 ORTHO05D010855 7.2e-55 217.2 129 88.4
Sopen05g009110 Solanum pennellii HOM05D008648 ORTHO05D010855 1.0e-53 213.4 129 86.8
Sopen07g022860 Solanum pennellii HOM05D008648 ORTHO05D010855 2.2e-48 195.7 125 81.6
Sopen03g008270 Solanum pennellii HOM05D008648 ORTHO05D010855 5.0e-32 141.4 77 90.9
Sopen11g025210 Solanum pennellii HOM05D008648 ORTHO05D010855 5.0e-32 141.4 77 90.9
Sopen03g007580 Solanum pennellii HOM05D008648 ORTHO05D010855 7.2e-31 137.5 77 87.0
Sopen03g024600 Solanum pennellii HOM05D008648 ORTHO05D010855 2.8e-30 135.6 77 87.0
Sopen11g017450 Solanum pennellii HOM05D008648 ORTHO05D010855 5.7e-28 127.9 129 61.2
Sopen07g021730 Solanum pennellii HOM05D008648 ORTHO05D010855 1.7e-27 126.3 75 81.3
Sopen01g021850 Solanum pennellii HOM05D000056 ORTHO05D010855 5.2e-21 104.8 88 62.5
Sopen01g024350 Solanum pennellii HOM05D000004 ORTHO05D001422 1.3e-19 100.1 65 75.4
Sopen08g009160 Solanum pennellii HOM05D008648 ORTHO05D010855 1.6e-17 93.2 67 70.1
CAN.G61.26 Capsicum annuum HOM05D000251 ORTHO05D005532 3.5e-17 92.0 74 62.2
Sopen03g011970 Solanum pennellii HOM05D008648 ORTHO05D010855 7.8e-17 90.9 71 62.0
Sopen04g015600 Solanum pennellii HOM05D008648 ORTHO05D010855 1.3e-16 90.1 67 67.2
Sopen03g015620 Solanum pennellii HOM05D008648 ORTHO05D010855 3.0e-16 89.0 64 65.6
Sopen10g018080 Solanum pennellii HOM05D008648 ORTHO05D010855 3.9e-16 88.6 95 54.7
Sopen12g009430 Solanum pennellii HOM05D008648 ORTHO05D000001 3.9e-16 88.6 77 57.1
Sopen07g013200 Solanum pennellii HOM05D008648 ORTHO05D010855 8.6e-16 87.4 64 64.1
Sopen07g019980 Solanum pennellii HOM05D008648 ORTHO05D010855 8.6e-16 87.4 67 67.2
Sopen05g019510 Solanum pennellii HOM05D008648 ORTHO05D010855 1.5e-15 86.7 122 44.3
Sopen09g009480 Solanum pennellii HOM05D008648 ORTHO05D010855 2.5e-15 85.9 64 62.5
Sopen04g016480 Solanum pennellii HOM05D000004 ORTHO05D000034 3.3e-15 85.5 64 62.5
Sopen12g010200 Solanum pennellii HOM05D008648 ORTHO05D010855 4.3e-15 85.1 64 62.5
Sopen02g010950 Solanum pennellii HOM05D008648 ORTHO05D010855 5.6e-15 84.7 64 60.9
Sopen04g024660 Solanum pennellii HOM05D008648 ORTHO05D010882 5.6e-15 84.7 64 64.1
Sopen10g027020 Solanum pennellii HOM05D008648 ORTHO05D010855 5.6e-15 84.7 64 64.1
Sopen01g023440 Solanum pennellii HOM05D008648 ORTHO05D010855 7.3e-15 84.3 61 60.7
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 7.3e-15 84.3 60 61.7
Sopen03g024630 Solanum pennellii HOM05D008648 ORTHO05D010855 9.5e-15 84.0 64 64.1
Sopen02g011750 Solanum pennellii HOM05D008648 ORTHO05D010855 1.2e-14 83.6 64 62.5
Sopen01g025160 Solanum pennellii HOM05D000017 ORTHO05D001349 1.6e-14 83.2 62 72.6
Sopen07g024080 Solanum pennellii HOM05D008648 ORTHO05D010855 2.1e-14 82.8 60 61.7
Sopen05g017010 Solanum pennellii HOM05D008648 ORTHO05D010855 6.2e-14 81.3 64 60.9
Sopen03g010260 Solanum pennellii HOM05D008648 ORTHO05D000034 1.1e-13 80.5 91 48.4
Sopen12g014240 Solanum pennellii HOM05D008648 ORTHO05D010855 1.4e-13 80.1 64 59.4
Solyc10g052603.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 4.9e-11 71.6 48 77.1
Sopen04g013060 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-09 65.5 62 51.6
Sopen12g008590 Solanum pennellii HOM05D029176 ORTHO05D030657 6.0e-09 64.7 157 33.8
Sopen01g007020 Solanum pennellii HOM05D008648 ORTHO05D010855 1.3e-08 63.5 46 69.6
Sopen03g025120 Solanum pennellii HOM05D008648 ORTHO05D010855 1.3e-08 63.5 46 69.6
Sopen11g007670 Solanum pennellii HOM05D008648 ORTHO05D010855 1.3e-08 63.5 46 69.6
PSO063G2512 Papaver somniferum HOM05D000030 ORTHO05D000031 8.6e-08 60.8 60 45.0
PSO063G6406 Papaver somniferum HOM05D000030 ORTHO05D000023 8.6e-08 60.8 60 45.0
CAN.G222.13 Capsicum annuum HOM05D000311 ORTHO05D000183 1.1e-07 60.5 58 44.8
CAN.G999.20 Capsicum annuum HOM05D002295 ORTHO05D002789 1.1e-07 60.5 59 44.1
Sopen12g009790 Solanum pennellii HOM05D008562 ORTHO05D009932 1.1e-07 60.5 114 38.6
Sopen05g014600 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-07 60.1 44 63.6
Sopen09g013990 Solanum pennellii HOM05D008648 ORTHO05D010855 3.3e-07 58.9 44 63.6
FvH4_2g26901 Fragaria vesca HOM05D000030 ORTHO05D000031 5.6e-07 58.2 57 49.1
CAN.G135.24 Capsicum annuum HOM05D003445 ORTHO05D004114 7.3e-07 57.8 123 30.1
PSO170G2330 Papaver somniferum HOM05D000030 ORTHO05D000031 7.3e-07 57.8 70 41.4
Os02g0828533 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000031 9.5e-07 57.4 78 39.7
Sopen10g021370 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-07 57.4 39 64.1
Sopen11g025000 Solanum pennellii HOM05D008648 ORTHO05D010855 1.2e-06 57.0 42 61.9
Sopen12g014400 Solanum pennellii HOM05D008648 ORTHO05D010855 1.2e-06 57.0 46 60.9
Thhalv10016147m.g Eutrema salsugineum HOM05D000108 ORTHO05D001149 1.6e-06 56.6 58 46.6
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 2.1e-06 56.2 57 47.4
Sopen05g021500 Solanum pennellii HOM05D008562 ORTHO05D009932 2.1e-06 56.2 45 60.0
HanXRQChr04g0117801 Helianthus annuus HOM05D000030 ORTHO05D000031 2.8e-06 55.8 60 41.7
HanXRQChr08g0231381 Helianthus annuus HOM05D000030 ORTHO05D000009 2.8e-06 55.8 60 41.7
PSO319G0001 Papaver somniferum HOM05D013072 ORTHO05D000031 2.8e-06 55.8 57 47.4
PSO339G0886 Papaver somniferum HOM05D013072 ORTHO05D000031 2.8e-06 55.8 57 47.4
PSO832G3406 Papaver somniferum HOM05D000030 ORTHO05D000031 2.8e-06 55.8 54 44.4
Sopen12g015310 Solanum pennellii HOM05D008648 ORTHO05D010855 2.8e-06 55.8 44 59.1
EL10Ac5g12353 Beta vulgaris HOM05D000030 ORTHO05D000023 3.6e-06 55.5 71 39.4
EL10Ac7g15948 Beta vulgaris HOM05D000030 ORTHO05D000023 4.7e-06 55.1 71 39.4
Manes.11G130116 Manihot esculenta HOM05D000030 ORTHO05D000009 4.7e-06 55.1 58 41.4
Os12g0521300 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D000009 4.7e-06 55.1 57 45.6
Mapoly0061s0079 Marchantia polymorpha HOM05D000030 ORTHO05D000009 6.2e-06 54.7 63 39.7
ATR0598G059 Amborella trichopoda HOM05D000030 ORTHO05D009563 8.1e-06 54.3 75 36.0
FvH4_3g32841 Fragaria vesca HOM05D000030 ORTHO05D020648 8.1e-06 54.3 56 44.6
HanXRQChr09g0274761 Helianthus annuus HOM05D000030 ORTHO05D000031 8.1e-06 54.3 60 41.7
Mapoly4328s0001 Marchantia polymorpha HOM05D000030 ORTHO05D000023 8.1e-06 54.3 63 39.7
MapolyY_B0042 Marchantia polymorpha HOM05D000030 ORTHO05D000009 8.1e-06 54.3 63 39.7
QL93p1872_0051 Quercus lobata HOM05D000030 ORTHO05D000009 8.1e-06 54.3 57 43.9
Rhsim01G0148200 Rhododendron simsii HOM05D000030 ORTHO05D000031 8.1e-06 54.3 77 35.1
RcHm_v2.0_Chr7g0229391 Rosa chinensis HOM05D000030 ORTHO05D000031 8.1e-06 54.3 57 45.6
SHI33979 Sapria himalayana HOM05D000030 ORTHO05D000031 8.1e-06 54.3 60 35.0


User provided reference genes

Program Settings