Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g015200 Solanum pennellii HOM05D000141 ORTHO05D001968 2.9e-58 228.4 120 100.0
Sopen12g001240 Solanum pennellii HOM05D000141 ORTHO05D001968 6.3e-37 157.5 106 84.0
Solyc12g005250.2 Solanum lycopersicum HOM05D000141 ORTHO05D001968 9.1e-36 153.7 106 82.1
PGSC0003DMG400021807 Solanum tuberosum HOM05D000141 ORTHO05D001968 3.2e-33 145.2 106 79.2
Nitab4.5_0000092g0080 Nicotiana tabacum HOM05D000141 ORTHO05D001968 2.2e-29 132.5 86 84.9
Nitab4.5_0000749g0030 Nicotiana tabacum HOM05D000141 ORTHO05D001968 2.4e-28 129.0 106 70.8
Peaxi162Scf00000g00841 Petunia axillaris HOM05D000141 ORTHO05D001968 5.2e-23 111.3 106 63.2
CAN.G262.20 Capsicum annuum HOM05D000141 ORTHO05D001968 4.4e-22 108.2 106 65.1
Ciclev10014313m.g Citrus clementina HOM05D000141 ORTHO05D001968 5.7e-22 107.8 111 57.7
Ah.06g183110 Amaranthus hybridus HOM05D000141 ORTHO05D001968 3.1e-20 102.1 104 56.7
Sopen07g013650 Solanum pennellii HOM05D002720 ORTHO05D002901 5.3e-20 101.3 107 60.7
Sabra16G0283000 Salix brachista HOM05D000141 ORTHO05D001968 2.0e-19 99.4 111 55.9
CANSAT56G1430 Cannabis sativa HOM05D000141 ORTHO05D001968 3.5e-19 98.6 111 50.5
Actinidia05130 Actinidia chinensis HOM05D000141 ORTHO05D001968 7.7e-19 97.4 95 60.0
Lalb_Chr18g0060111 Lupinus albus HOM05D000141 ORTHO05D001968 1.0e-18 97.1 104 52.9
Sopen08g015260 Solanum pennellii HOM05D002720 ORTHO05D002901 1.0e-18 97.1 54 96.3
TWI38G1655 Tripterygium wilfordii HOM05D000141 ORTHO05D001968 1.7e-18 96.3 97 57.7
SalBow1G6387 Salvia bowleyana HOM05D000141 ORTHO05D001968 2.9e-18 95.5 93 63.4
SalBow8G2986 Salvia bowleyana HOM05D000141 ORTHO05D001968 2.9e-18 95.5 93 63.4
Hma1.2p1_1682F.1_g297330 Hydrangea macrophylla HOM05D000141 ORTHO05D001968 5.5e-17 91.3 103 51.5
Prupe.4G029200 Prunus persica HOM05D000141 ORTHO05D001968 5.5e-17 91.3 97 55.7
Cpa.g.sc81.9 Carica papaya HOM05D000141 ORTHO05D001968 7.2e-17 90.9 106 52.8
Hund02142 Selenicereus undatus HOM05D000141 ORTHO05D001968 1.2e-16 90.1 108 49.1
ClCG03G005120 Citrullus lanatus HOM05D000141 ORTHO05D001968 2.1e-16 89.4 106 51.9
Phvul.006G196400 Phaseolus vulgaris HOM05D000141 ORTHO05D001968 2.1e-16 89.4 104 48.1
DCAR_024924 Daucus carota HOM05D000141 ORTHO05D001968 2.7e-16 89.0 104 50.0
MELO3C002509.2 Cucumis melo HOM05D000141 ORTHO05D001968 3.6e-16 88.6 106 50.9
CsaV3_1G011320 Cucumis sativus L. HOM05D000141 ORTHO05D001968 3.6e-16 88.6 106 50.9
Lalb_Chr20g0122651 Lupinus albus HOM05D000141 ORTHO05D001968 6.1e-16 87.8 92 56.5
Sed0021398 Sechium edule HOM05D000141 ORTHO05D001968 6.1e-16 87.8 102 52.0
QL05p077145 Quercus lobata HOM05D000141 ORTHO05D001968 8.0e-16 87.4 106 48.1
QL93p0073_1235 Quercus lobata HOM05D000141 ORTHO05D001968 8.0e-16 87.4 106 48.1
Sed0006809 Sechium edule HOM05D000141 ORTHO05D001968 8.0e-16 87.4 106 50.0
Hund23534 Selenicereus undatus HOM05D000141 ORTHO05D001968 1.0e-15 87.0 106 47.2
CiPaw.10G066600 Carya illinoinensis HOM05D000141 ORTHO05D001968 1.4e-15 86.7 106 48.1
Glyma.15G063200 Glycine max HOM05D000141 ORTHO05D001968 3.0e-15 85.5 106 47.2
CiPaw.09G080400 Carya illinoinensis HOM05D000141 ORTHO05D001968 4.0e-15 85.1 104 50.0
Rhsim02G0115000 Rhododendron simsii HOM05D000141 ORTHO05D001968 1.5e-14 83.2 106 47.2
HanXRQChr15g0495691 Helianthus annuus HOM05D000141 ORTHO05D001968 2.0e-14 82.8 101 47.5
Lj4g0020235 Lotus japonicus HOM05D000141 ORTHO05D001968 4.4e-14 81.6 102 49.0
Sc03g0009160 Simmondsia chinensis HOM05D000141 ORTHO05D001968 1.3e-13 80.1 111 50.5
PSO210G7308 Papaver somniferum HOM05D000141 ORTHO05D001968 1.7e-13 79.7 106 46.2
PSO832G1105 Papaver somniferum HOM05D000141 ORTHO05D001968 1.7e-13 79.7 106 46.2
Cfa016410 Carpinus fangiana HOM05D000141 ORTHO05D001968 2.8e-13 79.0 106 45.3
Dinv03943 Davidia involucrata HOM05D000141 ORTHO05D001968 4.8e-13 78.2 97 53.6
FvH4_3g21681 Fragaria vesca HOM05D000141 ORTHO05D001968 4.8e-13 78.2 93 54.8
FAN11G1924 Fragaria x ananassa HOM05D000141 ORTHO05D001968 4.8e-13 78.2 93 54.8
PGR004G2431 Punica granatum HOM05D000141 ORTHO05D001968 4.8e-13 78.2 95 49.5
RcHm_v2.0_Chr5g0037181 Rosa chinensis HOM05D000141 ORTHO05D001968 4.8e-13 78.2 93 54.8
CAN.G337.155 Capsicum annuum HOM05D000141 ORTHO05D001968 6.3e-13 77.8 89 56.2
Haze_06688 Corylus avellana HOM05D000141 ORTHO05D001968 6.3e-13 77.8 122 43.4
Sp7g25130 Schrenkiella parvula HOM05D000141 ORTHO05D001968 6.3e-13 77.8 111 40.5
A01p18350 Brassica napus HOM05D000141 ORTHO05D001968 8.3e-13 77.4 103 41.7
C01p23310 Brassica napus HOM05D000141 ORTHO05D001968 8.3e-13 77.4 103 41.7
BolC1t02268H Brassica oleracea HOM05D000141 ORTHO05D001968 8.3e-13 77.4 103 41.7
BraA01t01787Z Brassica rapa HOM05D000141 ORTHO05D001968 8.3e-13 77.4 103 41.7
TAR629G2130 Trochodendron aralioides HOM05D000141 ORTHO05D001968 8.3e-13 77.4 89 55.1
Actinidia09956 Actinidia chinensis HOM05D000141 ORTHO05D001968 1.4e-12 76.6 86 53.5
VMungo0251G0648 Vigna mungo HOM05D000141 ORTHO05D001968 1.4e-12 76.6 102 50.0
Thhalv10024503m.g Eutrema salsugineum HOM05D000141 ORTHO05D001968 1.8e-12 76.3 111 40.5
HanXRQChr11g0333041 Helianthus annuus HOM05D000141 ORTHO05D001968 4.1e-12 75.1 103 46.6
Hund23319 Selenicereus undatus HOM05D000141 ORTHO05D001968 4.1e-12 75.1 108 47.2
HanXRQChr03g0076311 Helianthus annuus HOM05D000141 ORTHO05D001968 7.0e-12 74.3 102 46.1
HanXRQChr11g0328001 Helianthus annuus HOM05D000141 ORTHO05D001968 7.0e-12 74.3 109 45.0
VMungo0331G1767 Vigna mungo HOM05D000141 ORTHO05D001968 7.0e-12 74.3 102 48.0
TPR.G32663 Trifolium pratense HOM05D000141 ORTHO05D001968 1.6e-11 73.2 111 39.6
DCAR_012724 Daucus carota HOM05D000141 ORTHO05D001968 2.0e-11 72.8 69 62.3
Nn1g06957 Nelumbo nucifera HOM05D000141 ORTHO05D001968 2.0e-11 72.8 88 52.3
Oeu062622.1 Olea europaea HOM05D000141 ORTHO05D001968 2.0e-11 72.8 106 47.2
arahy.Tifrunner.gnm1.ann1.R4UZW9 Arachis hypogaea HOM05D000141 ORTHO05D001968 3.5e-11 72.0 91 49.5
Ca_00206_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001968 4.5e-11 71.6 83 50.6
Glyma.08G062500 Glycine max HOM05D000141 ORTHO05D001968 4.5e-11 71.6 102 46.1
Glyma.13G251100 Glycine max HOM05D000141 ORTHO05D001968 5.9e-11 71.2 106 41.5
Manes.16G017100 Manihot esculenta HOM05D000141 ORTHO05D001968 5.9e-11 71.2 108 45.4
Sabra11G0018700 Salix brachista HOM05D000141 ORTHO05D001968 5.9e-11 71.2 83 49.4
Sabra11G0024600 Salix brachista HOM05D000141 ORTHO05D001968 5.9e-11 71.2 83 49.4
MSTRG.6886 Avicennia marina HOM05D000141 ORTHO05D001968 7.7e-11 70.9 72 59.7
Lalb_Chr16g0383241 Lupinus albus HOM05D000141 ORTHO05D001968 1.0e-10 70.5 106 44.3
Aa31LG9G9250 Aethionema arabicum HOM05D000141 ORTHO05D001968 1.3e-10 70.1 87 46.0
arahy.Tifrunner.gnm1.ann1.KY6G5X Arachis hypogaea HOM05D000141 ORTHO05D001968 1.7e-10 69.7 87 49.4
MD10G1311800 Malus domestica HOM05D000141 ORTHO05D001968 1.7e-10 69.7 92 47.8
Dinv18940 Davidia involucrata HOM05D000141 ORTHO05D001968 2.3e-10 69.3 104 43.3
Glyma.07G186700 Glycine max HOM05D000141 ORTHO05D001968 2.3e-10 69.3 102 45.1
Solyc09g048970.3 Solanum lycopersicum HOM05D002720 ORTHO05D002901 2.9e-10 68.9 99 48.5
COL.COLO4_31687 Corchorus olitorius HOM05D000141 ORTHO05D001968 3.8e-10 68.6 122 41.0
Potri.011G031200 Populus trichocarpa HOM05D000141 ORTHO05D001968 3.8e-10 68.6 80 50.0
Sopen07g032170 Solanum pennellii HOM05D000141 ORTHO05D001968 3.8e-10 68.6 55 67.3
PGSC0003DMG400019264 Solanum tuberosum HOM05D000141 ORTHO05D001968 5.0e-10 68.2 56 66.1
Oeu013858.2 Olea europaea HOM05D000141 ORTHO05D001968 8.6e-10 67.4 106 46.2
Oeu013860.1 Olea europaea HOM05D000141 ORTHO05D001968 8.6e-10 67.4 106 46.2
SGA_v2.0_scaffold34G13954 Striga asiatica HOM05D000141 ORTHO05D001968 8.6e-10 67.4 72 56.9
AUR62015634 Chenopodium quinoa HOM05D000141 ORTHO05D001968 1.1e-09 67.0 106 43.4
Nitab4.5_0002238g0070 Nicotiana tabacum HOM05D000141 ORTHO05D001968 1.1e-09 67.0 55 65.5
Lj1C862T8 Lonicera japonica HOM05D000141 ORTHO05D001968 1.5e-09 66.6 63 60.3
Lsat_1_v5_gn_7_108240 Lactuca sativa HOM05D000141 ORTHO05D001968 1.9e-09 66.2 84 51.2
Lj6g0000863 Lotus japonicus HOM05D000141 ORTHO05D001968 1.9e-09 66.2 76 51.3
Solyc07g064030.4 Solanum lycopersicum HOM05D000141 ORTHO05D001968 1.9e-09 66.2 55 65.5
CARHR227850 Cardamine hirsuta HOM05D000141 ORTHO05D001968 2.5e-09 65.9 85 44.7
Hund21318 Selenicereus undatus HOM05D000141 ORTHO05D001968 2.5e-09 65.9 91 46.2
TWI63G0112 Tripterygium wilfordii HOM05D000141 ORTHO05D001968 2.5e-09 65.9 82 50.0
AT4G21270 Arabidopsis thaliana HOM05D000141 ORTHO05D001968 3.3e-09 65.5 87 46.0
Carub.0008s1493 Capsella rubella HOM05D000141 ORTHO05D001968 4.2e-09 65.1 111 37.8
Hund21322 Selenicereus undatus HOM05D000141 ORTHO05D001968 4.2e-09 65.1 106 40.6
Carub.0007s1366 Capsella rubella HOM05D000141 ORTHO05D001968 5.5e-09 64.7 107 35.5
SGA_v2.0_scaffold9G05022 Striga asiatica HOM05D000141 ORTHO05D001968 7.2e-09 64.3 69 58.0
Duzib170G0721 Durio zibethinus HOM05D000141 ORTHO05D001968 1.2e-08 63.5 105 40.0
FAN21G3918 Fragaria x ananassa HOM05D000141 ORTHO05D001968 1.2e-08 63.5 93 48.4
MD11G1228000 Malus domestica HOM05D000141 ORTHO05D001968 1.2e-08 63.5 89 48.3
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 1.6e-08 63.2 90 46.7
Carub.0007s2016 Capsella rubella HOM05D000141 ORTHO05D001968 2.1e-08 62.8 87 43.7
MSTRG.14411 Avicennia marina HOM05D000141 ORTHO05D001968 4.7e-08 61.6 55 63.6
Peaxi162Scf01086g00147 Petunia axillaris HOM05D000141 ORTHO05D001968 1.0e-07 60.5 46 69.6
Lj1C1222T7 Lonicera japonica HOM05D000141 ORTHO05D001968 2.3e-07 59.3 108 38.9
vmacro11772 Vaccinium macrocarpon HOM05D000141 ORTHO05D001968 2.3e-07 59.3 84 50.0
AL8G30120 Arabidopsis lyrata HOM05D000141 ORTHO05D001968 4.0e-07 58.5 111 35.1
MD03G1212900 Malus domestica HOM05D000141 ORTHO05D001968 5.2e-07 58.2 89 46.1
Sp7g19350 Schrenkiella parvula HOM05D000141 ORTHO05D001968 5.2e-07 58.2 86 40.7
AL6G48790 Arabidopsis lyrata HOM05D000141 ORTHO05D001968 6.8e-07 57.8 86 43.0
AT5G54670 Arabidopsis thaliana HOM05D000141 ORTHO05D001968 6.8e-07 57.8 111 35.1
Phvul.002G218100 Phaseolus vulgaris HOM05D000141 ORTHO05D001968 6.8e-07 57.8 102 40.2
MSTRG.12951 Avicennia marina HOM05D000141 ORTHO05D001968 8.9e-07 57.4 69 52.2
Oeu007616.1 Olea europaea HOM05D000141 ORTHO05D001968 8.9e-07 57.4 70 52.9
EL10Ac4g07989 Beta vulgaris HOM05D000141 ORTHO05D001968 1.2e-06 57.0 73 47.9
Sabra04G0017900 Salix brachista HOM05D000141 ORTHO05D001968 2.0e-06 56.2 83 43.4
Aa31LG3G10600 Aethionema arabicum HOM05D000141 ORTHO05D001968 2.6e-06 55.8 111 35.1
Eucgr.E03592 Eucalyptus grandis HOM05D000141 ORTHO05D001968 2.6e-06 55.8 68 48.5
CSS0030624 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001968 3.4e-06 55.5 94 43.6
AUR62029238 Chenopodium quinoa HOM05D000141 ORTHO05D001968 3.4e-06 55.5 75 46.7
TWI39G1256 Tripterygium wilfordii HOM05D000141 ORTHO05D001968 5.7e-06 54.7 41 63.4
CSS0022316 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001968 9.8e-06 53.9 94 42.6


User provided reference genes

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