Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-265 919.5 476 100.0
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.1e-113 414.5 450 56.4
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 1.6e-112 410.6 454 56.6
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 8.7e-106 388.3 415 57.1
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-96 357.8 392 56.6
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.2e-94 351.3 381 58.5
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 9.3e-92 341.7 494 47.4
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-88 331.3 457 48.8
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 4.5e-86 322.8 393 52.4
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 3.6e-83 313.2 401 51.4
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 3.6e-83 313.2 414 50.7
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 9.7e-81 305.1 502 44.2
PGSC0003DMG400045026 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.5e-78 296.2 407 49.4
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 5.9e-78 295.8 408 49.0
PGSC0003DMG400045641 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.9e-77 293.5 272 63.6
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.5e-76 290.4 390 49.2
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 3.7e-72 276.6 394 46.7
Sopen01g007080 Solanum pennellii HOM05D007930 ORTHO05D000062 3.1e-71 273.5 262 61.8
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 2.6e-70 270.4 396 47.2
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-69 268.1 406 46.3
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 7.2e-68 262.3 376 46.3
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 9.4e-68 261.9 440 43.0
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-66 257.7 398 45.0
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 2.3e-66 257.3 372 47.0
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 3.0e-66 256.9 384 45.6
PGSC0003DMG400014072 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.2e-64 250.8 333 51.1
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-63 248.4 394 44.2
Sopen08g007420 Solanum pennellii HOM05D007930 ORTHO05D007166 3.1e-63 246.9 370 47.3
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 5.3e-63 246.1 342 48.0
PGSC0003DMG400042050 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.2e-62 245.0 236 61.4
PGSC0003DMG400036502 Solanum tuberosum HOM05D007930 ORTHO05D007166 7.2e-60 235.7 285 53.3
PGSC0003DMG400042482 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.1e-59 232.6 210 62.4
Sopen11g021650 Solanum pennellii HOM05D007930 ORTHO05D007166 5.3e-55 219.5 240 56.7
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-53 214.9 379 42.2
Sopen03g016440 Solanum pennellii HOM05D007930 ORTHO05D007166 1.9e-52 211.1 272 49.6
Sopen05g013740 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-51 208.4 251 53.0
PGSC0003DMG400045984 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.1e-51 206.1 286 48.6
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 4.4e-49 199.9 310 45.2
PGSC0003DMG400043168 Solanum tuberosum HOM05D007930 ORTHO05D007166 7.0e-47 192.6 161 67.1
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.2e-46 191.8 407 38.1
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 2.3e-45 187.6 189 58.7
PGSC0003DMG400047111 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.2e-42 176.4 192 56.2
PGSC0003DMG400039419 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.7e-40 171.4 181 57.5
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-37 160.6 334 36.8
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 1.1e-36 158.7 113 73.5
PGSC0003DMG400045533 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.3e-36 157.1 139 64.7
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 4.3e-36 156.8 112 75.0
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-35 154.5 180 54.4
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 2.1e-35 154.5 120 70.8
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 8.9e-34 149.1 343 37.0
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 2.0e-33 147.9 130 65.4
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 5.8e-33 146.4 112 70.5
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.7e-32 144.8 93 80.6
PGSC0003DMG400046823 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.7e-32 143.7 399 33.3
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 4.9e-32 143.3 90 82.2
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 1.1e-31 142.1 112 67.9
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 5.4e-31 139.8 282 39.0
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 7.0e-31 139.4 91 78.0
PGSC0003DMG400037542 Solanum tuberosum HOM05D007930 ORTHO05D007166 9.2e-31 139.0 101 74.3
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-28 132.1 89 76.4
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 2.8e-27 127.5 366 33.6
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 4.0e-26 123.6 234 38.5
Sopen09g017090 Solanum pennellii HOM05D007930 ORTHO05D009932 1.3e-24 118.6 92 70.7
PGSC0003DMG400046364 Solanum tuberosum HOM05D007930 ORTHO05D007166 9.2e-23 112.5 279 32.3
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 6.0e-22 109.8 85 69.4
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 1.7e-21 108.2 77 72.7
Sopen04g019050 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-20 104.0 247 34.8
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 7.3e-20 102.8 387 26.4
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 1.2e-19 102.1 131 38.2
PGSC0003DMG400009722 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.6e-17 94.4 65 75.4
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 5.8e-17 93.2 167 36.5
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 2.9e-16 90.9 152 36.8
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.1e-15 89.0 343 26.2
PGSC0003DMG400043533 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.1e-15 89.0 62 71.0
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 4.1e-15 87.0 59 74.6
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 5.4e-15 86.7 318 23.6
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 5.4e-15 86.7 318 23.6
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 2.7e-14 84.3 167 31.7
PGSC0003DMG400038760 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.6e-14 83.6 158 38.0
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 1.7e-13 81.6 114 37.7
Sopen12g011410 Solanum pennellii HOM05D007930 ORTHO05D007166 3.0e-13 80.9 62 66.1
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 6.6e-13 79.7 166 32.5
Ca_14008_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 1.5e-12 78.6 108 40.7
Psat5g082960 Pisum sativum HOM05D008859 ORTHO05D007166 1.9e-12 78.2 94 44.7
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 2.5e-12 77.8 276 30.1
Ca_03071_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 3.3e-12 77.4 108 39.8
PGSC0003DMG400046198 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.3e-12 77.4 45 86.7
Sopen04g011400 Solanum pennellii HOM05D000107 ORTHO05D000062 4.3e-12 77.0 113 44.2
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 9.5e-12 75.9 101 42.6
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 1.2e-11 75.5 101 42.6
Sopen01g009500 Solanum pennellii HOM05D007930 ORTHO05D007166 1.6e-11 75.1 86 50.0
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 2.8e-11 74.3 150 34.0
Ca_05541_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 3.6e-11 73.9 106 39.6
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 3.6e-11 73.9 101 42.6
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 8.1e-11 72.8 336 22.6
Sopen01g021130 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-10 71.6 83 49.4
Sopen08g019920 Solanum pennellii HOM05D008041 ORTHO05D000385 8.9e-10 69.3 177 31.1
Sopen11g023140 Solanum pennellii HOM05D000107 ORTHO05D000062 8.9e-10 69.3 199 30.7
Lj3g0009883 Lotus japonicus HOM05D008859 ORTHO05D007166 2.0e-09 68.2 111 35.1
Ca_13632_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 2.6e-09 67.8 180 31.1
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.3e-08 65.5 110 37.3
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 2.2e-08 64.7 85 43.5
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 4.9e-08 63.5 65 41.5
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 4.9e-08 63.5 195 32.3
TPR.G18975 Trifolium pratense HOM05D007930 ORTHO05D030188 4.9e-08 63.5 54 53.7
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 6.4e-08 63.2 195 30.8
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 6.4e-08 63.2 195 30.8
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 6.4e-08 63.2 195 30.8
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 6.4e-08 63.2 195 30.8
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 6.4e-08 63.2 195 30.8
Medtr6g043310 Medicago truncatula HOM05D008859 ORTHO05D007166 1.4e-07 62.0 82 41.5
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 2.4e-07 61.2 68 41.2
TPR.G17520 Trifolium pratense HOM05D008859 ORTHO05D007166 2.4e-07 61.2 79 39.2
Sopen03g010950 Solanum pennellii HOM05D008041 ORTHO05D000385 7.1e-07 59.7 138 31.2
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 9.2e-07 59.3 247 23.9
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 9.2e-07 59.3 103 35.9
Ca_25708_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 3.5e-06 57.4 108 33.3
PGSC0003DMG400044440 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.5e-06 57.4 76 46.1
Psat5g249440 Pisum sativum HOM05D009811 ORTHO05D007166 7.8e-06 56.2 59 45.8


User provided reference genes

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