Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g012020 Solanum pennellii HOM05D010553 ORTHO05D000034 2.1e-114 415.6 196 100.0
PGSC0003DMG400037635 Solanum tuberosum HOM05D010553 ORTHO05D000034 2.5e-67 259.2 157 78.3
PGSC0003DMG400042649 Solanum tuberosum HOM05D010553 ORTHO05D000034 9.5e-67 257.3 161 77.6
Sopen05g027980 Solanum pennellii HOM05D010553 ORTHO05D000034 2.3e-65 252.7 157 77.7
Sopen11g016350 Solanum pennellii HOM05D010553 ORTHO05D000034 7.8e-61 237.7 151 76.2
PGSC0003DMG400040359 Solanum tuberosum HOM05D010553 ORTHO05D000034 9.5e-59 230.7 157 68.8
Sopen06g013690 Solanum pennellii HOM05D010553 ORTHO05D000034 6.2e-58 228.0 157 70.7
Sopen09g023530 Solanum pennellii HOM05D010553 ORTHO05D000034 1.4e-54 216.9 172 65.1
Sopen12g011460 Solanum pennellii HOM05D010553 ORTHO05D000034 1.7e-52 209.9 151 69.5
PGSC0003DMG400035681 Solanum tuberosum HOM05D010553 ORTHO05D000034 1.5e-48 196.8 125 76.8
PGSC0003DMG400042540 Solanum tuberosum HOM05D010553 ORTHO05D000034 1.4e-46 190.3 144 66.7
PGSC0003DMG400035603 Solanum tuberosum HOM05D010553 ORTHO05D000034 1.9e-43 179.9 116 73.3
Sopen12g010150 Solanum pennellii HOM05D000004 ORTHO05D000034 4.8e-42 175.3 111 77.5
Sopen12g020490 Solanum pennellii HOM05D010553 ORTHO05D000034 7.6e-40 167.9 101 82.2
Sopen10g012740 Solanum pennellii HOM05D010553 ORTHO05D000034 4.3e-35 152.1 84 82.1
PGSC0003DMG400043417 Solanum tuberosum HOM05D010553 ORTHO05D000034 8.1e-34 147.9 108 70.4
Sopen03g011580 Solanum pennellii HOM05D000004 ORTHO05D000034 3.1e-33 146.0 97 71.1
PGSC0003DMG400036702 Solanum tuberosum HOM05D010553 ORTHO05D000034 9.0e-33 144.4 87 80.5
Sopen04g014330 Solanum pennellii HOM05D000014 ORTHO05D000016 1.2e-32 144.1 105 66.7
Sopen11g016480 Solanum pennellii HOM05D010553 ORTHO05D000034 2.6e-32 142.9 99 71.7
PGSC0003DMG400040935 Solanum tuberosum HOM05D010553 ORTHO05D000034 3.4e-32 142.5 157 51.0
PGSC0003DMG400009723 Solanum tuberosum HOM05D003808 ORTHO05D008840 5.5e-30 135.2 151 50.3
Sopen12g027490 Solanum pennellii HOM05D000014 ORTHO05D000016 6.7e-28 128.3 157 48.4
Sopen11g016470 Solanum pennellii HOM05D010553 ORTHO05D000034 1.8e-25 120.2 169 43.2
Sopen12g013830 Solanum pennellii HOM05D010553 ORTHO05D000034 8.2e-18 94.7 57 75.4
Sopen05g020230 Solanum pennellii HOM05D010553 ORTHO05D000034 1.2e-16 90.9 116 46.6
Sopen07g019250 Solanum pennellii HOM05D000004 ORTHO05D000034 2.0e-11 73.6 53 62.3
Hma1.2p1_0142F.1_g064210 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.8e-10 68.9 88 36.4
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 6.3e-10 68.6 62 43.5
Hma1.2p1_0866F.1_g230150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.1e-09 67.8 66 42.4
Hma1.2p1_0032F.1_g019000 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.1e-09 65.9 62 41.9
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 5.3e-09 65.5 88 36.4
Sopen11g012830 Solanum pennellii HOM05D000004 ORTHO05D000002 5.3e-09 65.5 50 64.0
ClCG04G003440 Citrullus lanatus HOM05D000004 ORTHO05D000034 9.1e-09 64.7 143 28.7
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 9.1e-09 64.7 88 34.1
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.5e-08 63.9 115 30.4
MELO3C033340.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.0e-08 63.5 83 32.5
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 2.6e-08 63.2 115 30.4
SHI50214 Sapria himalayana HOM05D000004 ORTHO05D000002 7.7e-08 61.6 147 28.6
Oeu018629.1 Olea europaea HOM05D008284 ORTHO05D000224 1.0e-07 61.2 71 38.0
Oeu018768.1 Olea europaea HOM05D008284 ORTHO05D000224 1.7e-07 60.5 63 41.3
Oeu022994.1 Olea europaea HOM05D008284 ORTHO05D000224 1.7e-07 60.5 62 41.9
SHI40336 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-07 60.1 111 31.5
SHI50774 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-07 60.1 111 31.5
SHI51461 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-07 60.1 111 31.5
SHI53605 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-07 60.1 111 31.5
ClCG08G003900 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.9e-07 59.7 143 27.3
Manes.10G099101 Manihot esculenta HOM05D000004 ORTHO05D000034 2.9e-07 59.7 113 31.9
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 2.9e-07 59.7 65 36.9
MELO3C032614.2 Cucumis melo HOM05D007786 ORTHO05D000224 5.0e-07 58.9 69 34.8
Manes.14G148397 Manihot esculenta HOM05D000004 ORTHO05D000034 5.0e-07 58.9 104 32.7
Manes.14G148419 Manihot esculenta HOM05D000004 ORTHO05D000034 5.0e-07 58.9 104 32.7
Oeu064005.1 Olea europaea HOM05D000004 ORTHO05D000034 5.0e-07 58.9 65 40.0
SHI51991 Sapria himalayana HOM05D000004 ORTHO05D000002 5.0e-07 58.9 111 30.6
Manes.08G134411 Manihot esculenta HOM05D000004 ORTHO05D000034 6.5e-07 58.5 109 32.1
Manes.15G183710 Manihot esculenta HOM05D000004 ORTHO05D000034 6.5e-07 58.5 104 32.7
Manes.16G051801 Manihot esculenta HOM05D000004 ORTHO05D000034 6.5e-07 58.5 104 32.7
Oeu047484.1 Olea europaea HOM05D008284 ORTHO05D000034 6.5e-07 58.5 70 40.0
SHI47577 Sapria himalayana HOM05D000004 ORTHO05D000002 6.5e-07 58.5 161 27.3
Manes.07G076922 Manihot esculenta HOM05D000004 ORTHO05D000034 8.5e-07 58.2 105 32.4
Manes.16G075950 Manihot esculenta HOM05D000004 ORTHO05D000034 8.5e-07 58.2 100 33.0
Oeu011745.1 Olea europaea HOM05D000004 ORTHO05D000224 8.5e-07 58.2 57 38.6
MELO3C029128.2 Cucumis melo HOM05D000004 ORTHO05D000224 1.1e-06 57.8 57 38.6
MELO3C029130.2 Cucumis melo HOM05D008649 ORTHO05D000224 1.1e-06 57.8 89 30.3
Manes.01G066666 Manihot esculenta HOM05D000004 ORTHO05D000034 1.1e-06 57.8 101 32.7
Manes.18G140597 Manihot esculenta HOM05D000004 ORTHO05D000034 1.1e-06 57.8 101 32.7
Ca_14499_v3 Cicer arietinum L. HOM05D001980 ORTHO05D000224 1.4e-06 57.4 127 26.8
HanXRQChr17g0539041 Helianthus annuus HOM05D000004 ORTHO05D000224 1.4e-06 57.4 84 35.7
Manes.18G139308 Manihot esculenta HOM05D000004 ORTHO05D000034 1.4e-06 57.4 102 32.4
Manes.18G144913 Manihot esculenta HOM05D000004 ORTHO05D000034 1.4e-06 57.4 109 31.2
Oeu002304.1 Olea europaea HOM05D000004 ORTHO05D000224 1.4e-06 57.4 97 33.0
MELO3C032168.2 Cucumis melo HOM05D007786 ORTHO05D000224 1.9e-06 57.0 69 33.3
Oeu048099.1 Olea europaea HOM05D008284 ORTHO05D000034 1.9e-06 57.0 65 38.5
Oeu050910.1 Olea europaea HOM05D000004 ORTHO05D000224 1.9e-06 57.0 57 36.8
SHI42770 Sapria himalayana HOM05D000004 ORTHO05D000002 1.9e-06 57.0 152 25.7
SHI42953 Sapria himalayana HOM05D000004 ORTHO05D000002 1.9e-06 57.0 152 25.7
FvH4_4g15585 Fragaria vesca HOM05D000004 ORTHO05D000002 2.5e-06 56.6 131 25.2
Oeu023218.1 Olea europaea HOM05D008284 ORTHO05D000034 2.5e-06 56.6 97 33.0
Rhsim02G0115700 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.5e-06 56.6 57 40.4
MBI19_g33418_MAGBIO Magnolia biondii HOM05D010253 ORTHO05D000224 3.2e-06 56.2 81 28.4
Manes.12G118805 Manihot esculenta HOM05D000004 ORTHO05D000034 3.2e-06 56.2 98 32.7
Oeu061980.1 Olea europaea HOM05D000004 ORTHO05D000224 3.2e-06 56.2 63 33.3
Rhsim11G0061300 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.2e-06 56.2 127 27.6
CANSAT11G1617 Cannabis sativa HOM05D000004 ORTHO05D000034 4.2e-06 55.8 90 31.1
Oeu026329.1 Olea europaea HOM05D008284 ORTHO05D000034 4.2e-06 55.8 62 40.3
Oeu054402.1 Olea europaea HOM05D000004 ORTHO05D000224 4.2e-06 55.8 57 35.1
Oeu055711.1 Olea europaea HOM05D008284 ORTHO05D000224 4.2e-06 55.8 62 40.3
Oeu060665.1 Olea europaea HOM05D008284 ORTHO05D000224 4.2e-06 55.8 62 40.3
Rhsim03G0130600 Rhododendron simsii HOM05D000004 ORTHO05D000034 4.2e-06 55.8 80 35.0
ClCG01G012390 Citrullus lanatus HOM05D000004 ORTHO05D000034 5.5e-06 55.5 143 28.7
Oeu045530.1 Olea europaea HOM05D008284 ORTHO05D000224 5.5e-06 55.5 59 39.0
Rhsim02G0020600 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.2e-06 55.1 57 38.6
Rhsim06G0134400 Rhododendron simsii HOM05D000004 ORTHO05D000034 7.2e-06 55.1 57 38.6
Rhsim07G0206500 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.2e-06 55.1 57 38.6
Rhsim11G0017800 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.2e-06 55.1 57 38.6
MELO3C028093.2 Cucumis melo HOM05D000004 ORTHO05D000034 9.4e-06 54.7 69 33.3
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 9.4e-06 54.7 72 38.9
Oeu013930.1 Olea europaea HOM05D008284 ORTHO05D000034 9.4e-06 54.7 62 40.3
Rhsim04G0149400 Rhododendron simsii HOM05D000004 ORTHO05D000224 9.4e-06 54.7 80 35.0
Sopen01g018040 Solanum pennellii HOM05D000004 ORTHO05D000034 9.4e-06 54.7 37 73.0


User provided reference genes

Program Settings