Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 8.3e-91 337.0 172 100.0
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 6.6e-88 327.4 173 97.7
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 2.3e-77 292.4 175 88.6
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 2.1e-54 216.1 189 62.4
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.3e-46 190.3 199 55.3
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 9.0e-45 184.1 194 54.6
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 6.7e-24 114.8 129 51.9
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 6.3e-22 108.2 159 45.9
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 4.5e-20 102.1 152 44.1
Oeu057292.1 Olea europaea HOM05D003969 ORTHO05D003125 1.3e-19 100.5 183 41.0
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 2.9e-19 99.4 135 48.9
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 1.9e-18 96.7 122 46.7
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 2.5e-18 96.3 139 43.2
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.2e-18 95.5 122 45.1
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.5e-18 95.1 144 44.4
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 5.5e-18 95.1 124 45.2
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 7.2e-18 94.7 141 44.7
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 9.4e-18 94.4 127 44.1
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 2.1e-17 93.2 141 44.7
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.1e-17 93.2 121 46.3
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 2.7e-17 92.8 140 46.4
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 4.7e-17 92.0 135 46.7
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 1.0e-16 90.9 140 42.9
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 3.0e-16 89.4 123 45.5
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 6.7e-16 88.2 123 46.3
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 8.8e-16 87.8 101 51.5
MSTRG.26029 Avicennia marina HOM05D003969 ORTHO05D003125 4.4e-15 85.5 121 44.6
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.4e-15 85.5 122 41.8
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.4e-15 85.5 122 41.8
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.8e-14 82.0 122 42.6
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 6.3e-14 81.6 142 36.6
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 8.2e-14 81.3 136 40.4
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 8.2e-14 81.3 125 43.2
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.4e-13 80.5 133 39.8
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.4e-13 80.5 133 39.8
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 1.4e-13 80.5 142 35.9
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.2e-12 77.4 139 38.1
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 3.4e-12 75.9 133 39.1
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 7.7e-12 74.7 87 48.3
SGA_v2.0_scaffold64G21997 Striga asiatica HOM05D003969 ORTHO05D003125 7.7e-12 74.7 131 42.0
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 1.0e-11 74.3 115 40.9
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 1.7e-11 73.6 139 40.3
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 2.2e-11 73.2 115 38.3
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.9e-11 72.8 124 40.3
Sc23g0006570 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.9e-11 72.8 123 42.3
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 3.8e-11 72.4 110 37.3
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 3.8e-11 72.4 134 40.3
Lj5g0018030 Lotus japonicus HOM05D013068 ORTHO05D003125 8.5e-11 71.2 143 35.7
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 8.5e-11 71.2 63 54.0
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.4e-10 70.5 111 44.1
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 1.9e-10 70.1 63 60.3
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 1.9e-10 70.1 110 40.9
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 3.2e-10 69.3 73 50.7
Glyma.17G215400 Glycine max HOM05D013068 ORTHO05D003125 3.2e-10 69.3 83 49.4
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 3.2e-10 69.3 114 40.4
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 5.5e-10 68.6 99 47.5
MSTRG.10635 Avicennia marina HOM05D003969 ORTHO05D003125 7.2e-10 68.2 120 38.3
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 7.2e-10 68.2 68 51.5
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 7.2e-10 68.2 67 52.2
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 9.4e-10 67.8 73 52.1
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 9.4e-10 67.8 73 50.7
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 9.4e-10 67.8 122 38.5
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 1.2e-09 67.4 133 36.1
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 2.1e-09 66.6 130 35.4
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 2.1e-09 66.6 98 43.9
Eucgr.C01701 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.1e-09 66.6 70 51.4
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 2.1e-09 66.6 122 38.5
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 2.1e-09 66.6 69 53.6
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 2.7e-09 66.2 141 37.6
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 2.7e-09 66.2 114 38.6
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.6e-09 65.9 86 48.8
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 3.6e-09 65.9 89 44.9
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 4.7e-09 65.5 99 46.5
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 4.7e-09 65.5 126 36.5
Phvul.001G047400 Phaseolus vulgaris HOM05D013068 ORTHO05D003125 4.7e-09 65.5 126 41.3
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 4.7e-09 65.5 101 42.6
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 6.1e-09 65.1 139 35.3
BcaC07g37678 Brassica carinata HOM05D003969 ORTHO05D003125 6.1e-09 65.1 131 33.6
BolC8t48050H Brassica oleracea HOM05D003969 ORTHO05D003125 6.1e-09 65.1 131 33.6
Glyma.14G112500 Glycine max HOM05D003969 ORTHO05D003125 6.1e-09 65.1 131 41.2
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 6.1e-09 65.1 133 40.6
Sopen07g003200 Solanum pennellii HOM05D003969 ORTHO05D003125 6.1e-09 65.1 120 36.7
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 6.1e-09 65.1 119 36.1
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 8.0e-09 64.7 104 41.3
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 8.0e-09 64.7 124 34.7
Eucgr.C01640 Eucalyptus grandis HOM05D003969 ORTHO05D003125 8.0e-09 64.7 70 50.0
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.0e-08 64.3 136 36.0
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.0e-08 64.3 136 36.0
Medtr1g012950 Medicago truncatula HOM05D013068 ORTHO05D003125 1.0e-08 64.3 89 47.2
Actinidia23308 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.4e-08 63.9 107 40.2
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.4e-08 63.9 126 37.3
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 1.4e-08 63.9 110 38.2
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.4e-08 63.9 96 41.7
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 1.4e-08 63.9 121 36.4
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 1.8e-08 63.5 139 37.4
CARHR217160 Cardamine hirsuta HOM05D003969 ORTHO05D003125 1.8e-08 63.5 136 38.2
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.8e-08 63.5 64 48.4
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 1.8e-08 63.5 125 36.0
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 1.8e-08 63.5 86 41.9
Eucgr.C01698 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.8e-08 63.5 70 50.0
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 1.8e-08 63.5 60 53.3
MSTRG.10639 Avicennia marina HOM05D003969 ORTHO05D003125 2.3e-08 63.2 116 37.9
Eucgr.C01690 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.3e-08 63.2 68 50.0
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 3.0e-08 62.8 143 37.8
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 3.0e-08 62.8 113 39.8
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.0e-08 62.8 68 50.0
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.0e-08 62.8 65 52.3
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.0e-08 62.8 75 48.0
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.9e-08 62.4 68 50.0
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 3.9e-08 62.4 104 40.4
Sc08g0005750 Simmondsia chinensis HOM05D003969 ORTHO05D003125 3.9e-08 62.4 124 39.5
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 3.9e-08 62.4 119 35.3
PGSC0003DMG400036991 Solanum tuberosum HOM05D003969 ORTHO05D003125 3.9e-08 62.4 119 36.1
VMungo0647G1373 Vigna mungo HOM05D013068 ORTHO05D003125 3.9e-08 62.4 126 40.5
CDE02G3523 Ceratophyllum demersum HOM05D000894 ORTHO05D001833 5.2e-08 62.0 119 39.5
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.2e-08 62.0 70 48.6
TPR.G38870 Trifolium pratense HOM05D013068 ORTHO05D003125 5.2e-08 62.0 138 36.2
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 6.7e-08 61.6 132 34.1
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 6.7e-08 61.6 108 38.9
Eucgr.C01694 Eucalyptus grandis HOM05D003969 ORTHO05D003125 6.7e-08 61.6 69 49.3
PGSC0003DMG400030696 Solanum tuberosum HOM05D003969 ORTHO05D003125 6.7e-08 61.6 126 34.9
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 8.8e-08 61.2 130 32.3
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 8.8e-08 61.2 116 37.9
Lalb_Chr24g0402081 Lupinus albus HOM05D013068 ORTHO05D003125 8.8e-08 61.2 98 41.8
Thhalv10005689m.g Eutrema salsugineum HOM05D003969 ORTHO05D003125 1.1e-07 60.8 137 36.5
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.1e-07 60.8 104 39.4
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 1.1e-07 60.8 63 47.6
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 1.1e-07 60.8 138 34.1
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 1.1e-07 60.8 121 36.4
Eucgr.C01687 Eucalyptus grandis HOM05D003969 ORTHO05D003125 1.5e-07 60.5 67 52.2
Thecc.09G141500 Theobroma cacao HOM05D003969 ORTHO05D003125 1.5e-07 60.5 92 42.4
CAN.G551.21 Capsicum annuum HOM05D003969 ORTHO05D003125 2.0e-07 60.1 73 42.5
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.0e-07 60.1 65 47.7
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 2.0e-07 60.1 105 40.0
Rhsim01G0050100 Rhododendron simsii HOM05D016725 ORTHO05D003125 2.0e-07 60.1 97 39.2
Sp7g07270 Schrenkiella parvula HOM05D003969 ORTHO05D003125 2.0e-07 60.1 134 35.8
THA.LOC104808923 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 2.0e-07 60.1 109 37.6
Aa31sc598G40 Aethionema arabicum HOM05D003969 ORTHO05D003125 2.6e-07 59.7 130 36.2
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.6e-07 59.7 85 40.0
Gohir.D05G059000 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.6e-07 59.7 73 41.1
Sc23g0006550 Simmondsia chinensis HOM05D003969 ORTHO05D003125 2.6e-07 59.7 118 39.0
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 3.3e-07 59.3 128 30.5
AUR62012444 Chenopodium quinoa HOM05D003969 ORTHO05D003125 3.3e-07 59.3 85 40.0
Gorai.009G060100 Gossypium raimondii HOM05D003969 ORTHO05D003125 3.3e-07 59.3 73 41.1
SGA_v2.0_scaffold500G52494 Striga asiatica HOM05D003969 ORTHO05D003125 3.3e-07 59.3 108 38.0
Gohir.D05G012200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 4.4e-07 58.9 126 31.7
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 4.4e-07 58.9 123 35.8
Rhsim01G0050000 Rhododendron simsii HOM05D016725 ORTHO05D003125 4.4e-07 58.9 85 41.2
COL.COLO4_24105 Corchorus olitorius HOM05D003969 ORTHO05D003125 5.7e-07 58.5 92 41.3
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 5.7e-07 58.5 134 32.1
PSO384G4887 Papaver somniferum HOM05D000107 ORTHO05D000062 5.7e-07 58.5 94 39.4
EL10Ac2g04157 Beta vulgaris HOM05D003969 ORTHO05D003125 7.4e-07 58.2 134 31.3
A08p09570 Brassica napus HOM05D003969 ORTHO05D003125 7.4e-07 58.2 129 32.6
BraA08t32954Z Brassica rapa HOM05D003969 ORTHO05D003125 7.4e-07 58.2 129 32.6
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 7.4e-07 58.2 117 37.6
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 7.4e-07 58.2 126 36.5
Rhsim01G0052800 Rhododendron simsii HOM05D016725 ORTHO05D003125 7.4e-07 58.2 70 45.7
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 9.7e-07 57.8 117 36.8
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 9.7e-07 57.8 89 36.0
Lsat_1_v5_gn_5_39780 Lactuca sativa HOM05D003969 ORTHO05D003125 9.7e-07 57.8 142 33.1
HPP92_023807 Vanilla planifolia HOM05D003969 ORTHO05D003125 9.7e-07 57.8 65 43.1
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.3e-06 57.4 114 34.2
Nitab4.5_0017863g0010 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.3e-06 57.4 115 40.0
Sed0014973 Sechium edule HOM05D003969 ORTHO05D003125 2.2e-06 56.6 74 43.2
THA.LOC104815394 Tarenaya hassleriana HOM05D003969 ORTHO05D003125 2.8e-06 56.2 72 44.4
MELO3C030306.2 Cucumis melo HOM05D008824 ORTHO05D003125 3.7e-06 55.8 114 36.0
Gohir.A05G011500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 3.7e-06 55.8 80 40.0
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 4.8e-06 55.5 65 44.6
AL6G21690 Arabidopsis lyrata HOM05D008824 ORTHO05D003125 6.3e-06 55.1 66 48.5
arahy.Tifrunner.gnm1.ann1.8XJ8NX Arachis hypogaea HOM05D013068 ORTHO05D003125 6.3e-06 55.1 44 61.4
arahy.Tifrunner.gnm1.ann1.H8K6JA Arachis hypogaea HOM05D013068 ORTHO05D003125 6.3e-06 55.1 44 61.4
PGR142G4289 Punica granatum HOM05D003969 ORTHO05D003125 6.3e-06 55.1 135 35.6


User provided reference genes

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