Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g011870 Solanum pennellii HOM05D000590 ORTHO05D009145 2.1e-91 339.0 166 100.0
Nitab4.5_0005958g0030 Nicotiana tabacum HOM05D000590 ORTHO05D009145 9.0e-42 174.1 115 72.2
Nitab4.5_0002992g0010 Nicotiana tabacum HOM05D028555 ORTHO05D009145 2.9e-40 169.1 115 70.4
CAN.G669.5 Capsicum annuum HOM05D000590 ORTHO05D009145 2.7e-22 109.4 75 73.3
Dinv18158 Davidia involucrata HOM05D000590 ORTHO05D009145 1.1e-20 104.0 105 50.5
Thecc.09G020000 Theobroma cacao HOM05D000590 ORTHO05D009145 4.1e-18 95.5 102 45.1
TAR636G2375 Trochodendron aralioides HOM05D000590 ORTHO05D009145 9.0e-18 94.4 105 44.8
vmacro11208 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 1.2e-17 94.0 104 44.2
vmacro21896 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 1.2e-17 94.0 103 45.6
GSVIVG01035925001 Vitis vinifera HOM05D000590 ORTHO05D009145 1.5e-17 93.6 106 44.3
Cfa013108 Carpinus fangiana HOM05D000590 ORTHO05D009145 2.0e-17 93.2 118 42.4
Atru.chr7.2494 Acer truncatum HOM05D000590 ORTHO05D009145 4.5e-17 92.0 104 43.3
Lj7A728T60 Lonicera japonica HOM05D000590 ORTHO05D009145 4.5e-17 92.0 104 42.3
Sabra18G0025500 Salix brachista HOM05D000590 ORTHO05D009145 4.5e-17 92.0 119 43.7
TWI32G0726 Tripterygium wilfordii HOM05D000590 ORTHO05D009145 4.5e-17 92.0 104 45.2
Potri.018G023000 Populus trichocarpa HOM05D000590 ORTHO05D009145 7.7e-17 91.3 119 43.7
Ciclev10010345m.g Citrus clementina HOM05D000590 ORTHO05D009145 1.0e-16 90.9 117 37.6
CiPaw.07G226700 Carya illinoinensis HOM05D000590 ORTHO05D009145 1.3e-16 90.5 110 43.6
Duzib168G1510 Durio zibethinus HOM05D000590 ORTHO05D009145 1.3e-16 90.5 101 41.6
Actinidia13216 Actinidia chinensis HOM05D000590 ORTHO05D009145 2.9e-16 89.4 106 44.3
QL02p020481 Quercus lobata HOM05D000590 ORTHO05D009145 2.9e-16 89.4 105 41.9
CSS0004481 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D009145 6.5e-16 88.2 140 39.3
Dinv18162 Davidia involucrata HOM05D000590 ORTHO05D009145 6.5e-16 88.2 87 48.3
Manes.03G012400 Manihot esculenta HOM05D000590 ORTHO05D009145 1.1e-15 87.4 55 61.8
Nn8g39696 Nelumbo nucifera HOM05D000590 ORTHO05D009145 1.1e-15 87.4 107 41.1
Hund04451 Selenicereus undatus HOM05D000590 ORTHO05D009145 1.1e-15 87.4 108 45.4
Ah.10g035720 Amaranthus hybridus HOM05D000590 ORTHO05D009145 1.4e-15 87.0 106 45.3
COL.COLO4_18904 Corchorus olitorius HOM05D000590 ORTHO05D009145 1.4e-15 87.0 132 36.4
Oeu010890.3 Olea europaea HOM05D000590 ORTHO05D009145 2.5e-15 86.3 115 41.7
Aqoxy7G03545 Aquilegia oxysepala HOM05D000590 ORTHO05D009145 5.5e-15 85.1 119 38.7
EL10Ac2g04159 Beta vulgaris HOM05D000590 ORTHO05D009145 7.2e-15 84.7 112 42.9
FAN27G0748 Fragaria x ananassa HOM05D000590 ORTHO05D009145 7.2e-15 84.7 102 42.2
Prupe.1G485700 Prunus persica HOM05D000590 ORTHO05D009145 7.2e-15 84.7 102 43.1
Lsat_1_v5_gn_1_43780 Lactuca sativa HOM05D000590 ORTHO05D009145 2.1e-14 83.2 80 48.8
RcHm_v2.0_Chr6g0297291 Rosa chinensis HOM05D000590 ORTHO05D009145 2.7e-14 82.8 102 42.2
Medtr1g012870 Medicago truncatula HOM05D000590 ORTHO05D009145 6.1e-14 81.6 110 45.5
SGA_v2.0_scaffold64G21984 Striga asiatica HOM05D000590 ORTHO05D009145 6.1e-14 81.6 74 51.4
Rhsim02G0205200 Rhododendron simsii HOM05D000590 ORTHO05D009145 7.9e-14 81.3 97 41.2
THA.LOC104815012 Tarenaya hassleriana HOM05D000590 ORTHO05D009145 7.9e-14 81.3 102 42.2
MD15G1130200 Malus domestica HOM05D000590 ORTHO05D009145 1.0e-13 80.9 102 40.2
Ca_13040_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 1.4e-13 80.5 64 54.7
Ca_30354_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 1.4e-13 80.5 64 54.7
ECA248G0426 Erigeron canadensis HOM05D000590 ORTHO05D009145 1.4e-13 80.5 112 40.2
HanXRQChr01g0030621 Helianthus annuus HOM05D000590 ORTHO05D009145 1.8e-13 80.1 77 46.8
AUR62031566 Chenopodium quinoa HOM05D000590 ORTHO05D009145 2.3e-13 79.7 113 40.7
FvH4_2g28350 Fragaria vesca HOM05D000590 ORTHO05D009145 2.3e-13 79.7 102 40.2
SalBow4G1906 Salvia bowleyana HOM05D000590 ORTHO05D009145 3.0e-13 79.3 92 44.6
TPR.G38859 Trifolium pratense HOM05D000590 ORTHO05D009145 3.9e-13 79.0 62 56.5
AUR62012442 Chenopodium quinoa HOM05D000590 ORTHO05D009145 5.1e-13 78.6 113 40.7
FAN20G2931 Fragaria x ananassa HOM05D000590 ORTHO05D009145 5.1e-13 78.6 102 40.2
CANSAT25G0126 Cannabis sativa HOM05D000590 ORTHO05D009145 6.7e-13 78.2 75 49.3
Phvul.001G047700 Phaseolus vulgaris HOM05D000590 ORTHO05D009145 8.8e-13 77.8 71 49.3
FAN24G2365 Fragaria x ananassa HOM05D000590 ORTHO05D009145 1.1e-12 77.4 102 40.2
Glyma.17G215200 Glycine max HOM05D000590 ORTHO05D009145 3.3e-12 75.9 71 47.9
Cc08_g00250 Coffea canephora HOM05D000590 ORTHO05D009145 9.7e-12 74.3 106 39.6
Glyma.14G112700 Glycine max HOM05D000590 ORTHO05D009145 9.7e-12 74.3 56 50.0
ATR0767G168 Amborella trichopoda HOM05D000590 ORTHO05D009145 4.8e-11 72.0 55 50.9
Mapoly0002s0198 Marchantia polymorpha HOM05D000590 ORTHO05D009145 4.8e-11 72.0 55 49.1
Solyc08g041740.1 Solanum lycopersicum HOM05D000590 ORTHO05D009145 6.3e-11 71.6 36 83.3
arahy.Tifrunner.gnm1.ann1.Y6F8M2 Arachis hypogaea HOM05D000590 ORTHO05D009145 8.2e-11 71.2 97 38.1
Pp3c1_28750 Physcomitrium patens HOM05D000590 ORTHO05D009145 6.9e-10 68.2 61 45.9
Haze_21466 Corylus avellana HOM05D000590 ORTHO05D009145 1.5e-09 67.0 129 35.7
Pp3c2_10000 Physcomitrium patens HOM05D000590 ORTHO05D009145 2.0e-09 66.6 59 47.5
Sc06g0000480 Simmondsia chinensis HOM05D000590 ORTHO05D009145 3.8e-08 62.4 51 51.0
Pp3c14_19990 Physcomitrium patens HOM05D000590 ORTHO05D009145 8.5e-08 61.2 111 30.6
Lj5g0010657 Lotus japonicus HOM05D000590 ORTHO05D009145 7.2e-07 58.2 41 56.1


User provided reference genes

Program Settings