Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 2.8e-108 395.2 190 100.0
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 5.5e-11 72.0 85 47.1
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 5.5e-11 72.0 74 51.4
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 2.1e-10 70.1 39 74.4
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 3.6e-10 69.3 82 43.9
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 4.7e-10 68.9 39 74.4
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 4.7e-10 68.9 72 45.8
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 4.7e-10 68.9 72 50.0
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 7.9e-10 68.2 39 74.4
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.0e-09 67.8 72 47.2
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.0e-09 67.8 73 45.2
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.0e-09 67.8 67 49.3
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.8e-09 67.0 46 60.9
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.8e-09 67.0 72 47.2
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.8e-09 67.0 49 59.2
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 1.8e-09 67.0 49 59.2
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.8e-09 67.0 41 61.0
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 1.8e-09 67.0 49 59.2
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 2.3e-09 66.6 72 45.8
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 2.3e-09 66.6 49 57.1
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 2.3e-09 66.6 85 41.2
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 2.3e-09 66.6 72 45.8
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 3.9e-09 65.9 72 45.8
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 3.9e-09 65.9 39 71.8
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 3.9e-09 65.9 82 41.5
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 5.1e-09 65.5 39 69.2
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 5.1e-09 65.5 39 69.2
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 5.1e-09 65.5 39 69.2
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 6.7e-09 65.1 39 69.2
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 6.7e-09 65.1 39 66.7
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 8.8e-09 64.7 39 64.1
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 8.8e-09 64.7 39 71.8
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 8.8e-09 64.7 72 47.2
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 8.8e-09 64.7 72 45.8
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 1.1e-08 64.3 39 69.2
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.1e-08 64.3 41 61.0
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.5e-08 63.9 39 64.1
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 2.0e-08 63.5 39 69.2
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 2.0e-08 63.5 39 64.1
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 2.0e-08 63.5 39 64.1
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 2.0e-08 63.5 54 53.7
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 2.6e-08 63.2 39 66.7
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 3.3e-08 62.8 45 57.8
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 3.3e-08 62.8 49 61.2
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 3.3e-08 62.8 72 45.8
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 3.3e-08 62.8 39 66.7
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 3.3e-08 62.8 39 64.1
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 4.4e-08 62.4 41 61.0
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 4.4e-08 62.4 41 61.0
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 4.4e-08 62.4 39 64.1
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 5.7e-08 62.0 72 44.4
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 5.7e-08 62.0 39 61.5
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 5.7e-08 62.0 57 47.4
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 7.4e-08 61.6 54 50.0
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 9.7e-08 61.2 57 45.6
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 9.7e-08 61.2 39 61.5
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 9.7e-08 61.2 39 61.5
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 1.3e-07 60.8 41 58.5
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 1.3e-07 60.8 41 58.5
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.3e-07 60.8 41 58.5
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.3e-07 60.8 41 58.5
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.3e-07 60.8 41 58.5
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 1.3e-07 60.8 39 56.4
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.3e-07 60.8 72 45.8
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 1.7e-07 60.5 41 56.1
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 1.7e-07 60.5 57 45.6
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.7e-07 60.5 39 61.5
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 2.2e-07 60.1 34 73.5
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.2e-07 60.1 73 42.5
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 2.2e-07 60.1 39 64.1
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 2.8e-07 59.7 41 58.5
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 2.8e-07 59.7 41 58.5
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 3.7e-07 59.3 45 53.3
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 3.7e-07 59.3 39 59.0
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 4.8e-07 58.9 39 59.0
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 4.8e-07 58.9 46 58.7
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 4.8e-07 58.9 46 58.7
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 4.8e-07 58.9 39 64.1
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 6.3e-07 58.5 49 51.0
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 6.3e-07 58.5 49 51.0
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 6.3e-07 58.5 73 41.1
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.3e-07 58.5 73 41.1
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.3e-07 58.5 73 41.1
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 6.3e-07 58.5 73 41.1
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 6.3e-07 58.5 72 38.9
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 8.2e-07 58.2 42 59.5
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 8.2e-07 58.2 45 51.1
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 8.2e-07 58.2 41 58.5
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 1.1e-06 57.8 73 43.8
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.1e-06 57.8 39 61.5
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 4.1e-06 55.8 39 56.4
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 5.3e-06 55.5 39 56.4
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 5.3e-06 55.5 39 56.4
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 7.0e-06 55.1 36 61.1


User provided reference genes

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