Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 1.8e-143 512.7 286 100.0
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 8.9e-106 387.5 246 85.0
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 1.6e-86 323.6 307 63.8
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.3e-85 320.5 313 68.1
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.6e-73 279.6 278 65.1
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.5e-63 246.5 321 48.9
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.3e-56 224.2 249 57.4
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 4.4e-44 182.6 137 70.1
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 3.4e-41 172.9 230 58.7
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 2.5e-39 166.8 302 41.1
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 2.6e-33 146.7 277 46.2
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 2.2e-32 143.7 228 41.2
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.7e-30 136.7 311 34.1
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.1e-30 135.6 294 36.1
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 9.7e-28 128.3 300 34.3
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 1.7e-27 127.5 300 33.3
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.8e-27 126.7 278 34.2
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.7e-27 126.3 296 34.8
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-26 123.6 94 71.3
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 1.2e-25 121.3 298 32.2
Sopen10g027270 Solanum pennellii HOM05D004064 ORTHO05D009909 1.6e-25 120.9 111 62.2
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 3.5e-25 119.8 298 31.9
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 3.5e-25 119.8 298 31.9
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 7.7e-25 118.6 111 61.3
Sopen11g024290 Solanum pennellii HOM05D004064 ORTHO05D009909 1.1e-23 114.8 129 62.8
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.5e-23 113.6 296 38.2
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.1e-22 110.5 281 32.7
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.6e-22 109.8 271 35.4
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 6.1e-22 109.0 295 31.9
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.5e-20 104.4 112 47.3
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 1.5e-20 104.4 121 43.0
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.6e-20 103.6 112 47.3
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 2.6e-20 103.6 121 43.8
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.7e-20 102.4 112 47.3
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.5e-20 102.1 101 49.5
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 7.5e-20 102.1 100 61.0
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 7.5e-20 102.1 87 50.6
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.3e-19 101.3 112 48.2
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.2e-19 100.5 259 40.2
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.7e-19 99.8 103 50.5
Solyc04g054360.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 3.7e-19 99.8 109 56.0
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 3.7e-19 99.8 104 54.8
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-18 98.2 74 58.1
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.4e-18 97.8 81 53.1
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.4e-18 97.8 85 55.3
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.8e-18 97.4 293 32.1
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-18 97.1 137 45.3
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-18 97.1 137 45.3
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 3.1e-18 96.7 137 45.3
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 2.0e-17 94.0 96 51.0
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-17 93.2 137 44.5
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.9e-17 92.4 89 50.6
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 5.9e-17 92.4 175 39.4
PGSC0003DMG400006499 Solanum tuberosum HOM05D004064 ORTHO05D009909 7.7e-17 92.0 127 58.3
Nitab4.5_0000831g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.3e-16 91.3 251 33.9
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 3.8e-16 89.7 292 36.0
Sopen10g012420 Solanum pennellii HOM05D003038 ORTHO05D009909 8.5e-16 88.6 78 64.1
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 4.2e-15 86.3 54 72.2
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 5.5e-15 85.9 140 41.4
CAN.G630.48 Capsicum annuum HOM05D004064 ORTHO05D009561 7.2e-15 85.5 177 44.6
CAN.G834.15 Capsicum annuum HOM05D004064 ORTHO05D009909 7.2e-15 85.5 82 59.8
Sopen02g005360 Solanum pennellii HOM05D004064 ORTHO05D009909 2.1e-14 84.0 108 52.8
CAN.G508.20 Capsicum annuum HOM05D004064 ORTHO05D009909 2.8e-14 83.6 229 39.7
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 1.0e-13 81.6 79 62.0
Sopen07g007160 Solanum pennellii HOM05D000017 ORTHO05D000013 3.4e-12 76.6 216 41.2
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.4e-12 76.6 90 45.6
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.8e-12 75.1 261 36.0
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.3e-11 72.4 81 48.1
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 8.3e-11 72.0 117 42.7
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-10 71.6 80 45.0
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-10 70.9 278 32.7
PGSC0003DMG400039421 Solanum tuberosum HOM05D005093 ORTHO05D009561 3.1e-10 70.1 78 46.2
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 7.0e-10 68.9 284 34.5
PGSC0003DMG400046490 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.2e-10 68.6 65 56.9
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.2e-10 68.6 97 43.3
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 1.2e-09 68.2 134 34.3
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 2.0e-09 67.4 92 42.4
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 2.0e-09 67.4 77 45.5
Sopen03g014420 Solanum pennellii HOM05D004064 ORTHO05D011910 3.5e-09 66.6 78 51.3
Sopen04g019260 Solanum pennellii HOM05D004064 ORTHO05D009909 3.5e-09 66.6 80 52.5
PGSC0003DMG400017483 Solanum tuberosum HOM05D000017 ORTHO05D009909 4.5e-09 66.2 72 55.6
Nitab4.5_0000113g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.0e-08 65.1 248 29.4
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 5.0e-08 62.8 93 40.9
Nitab4.5_0000498g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.0e-08 62.8 95 41.1
Nitab4.5_0003194g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-07 61.6 260 30.8
PGSC0003DMG400004105 Solanum tuberosum HOM05D000017 ORTHO05D009909 1.5e-07 61.2 270 34.8
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 1.9e-07 60.8 62 50.0
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 3.3e-07 60.1 61 50.8
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 4.3e-07 59.7 89 38.2
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 4.3e-07 59.7 103 38.8
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 4.3e-07 59.7 62 48.4
Sopen05g008970 Solanum pennellii HOM05D004064 ORTHO05D011910 5.6e-07 59.3 86 44.2
Nitab4.5_0001068g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 9.5e-07 58.5 272 25.7
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 1.2e-06 58.2 91 38.5
PGSC0003DMG400016298 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.2e-06 58.2 79 53.2
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 1.6e-06 57.8 54 55.6
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-06 57.8 99 40.4
Sopen03g019250 Solanum pennellii HOM05D000528 ORTHO05D001569 2.1e-06 57.4 54 53.7
CAN.G2504.1 Capsicum annuum HOM05D004064 ORTHO05D009909 3.6e-06 56.6 219 34.2
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 3.6e-06 56.6 62 46.8
Solyc03g070470.1 Solanum lycopersicum HOM05D000528 ORTHO05D001569 4.7e-06 56.2 54 55.6
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 6.1e-06 55.8 259 31.3
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 6.1e-06 55.8 89 37.1


User provided reference genes

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