Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 3.0e-90 335.1 161 100.0
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.5e-86 322.8 154 99.4
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 1.1e-81 306.6 158 94.3
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.2e-72 276.6 161 80.7
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 8.9e-71 270.4 159 81.1
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 6.4e-69 264.2 157 77.1
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 1.5e-46 189.9 153 58.8
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 2.3e-42 176.0 159 56.6
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 2.3e-42 176.0 157 55.4
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 5.1e-42 174.9 159 56.0
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 5.1e-42 174.9 140 59.3
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.5e-41 173.3 156 53.8
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 7.4e-41 171.0 156 53.2
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 7.4e-41 171.0 156 53.2
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 9.6e-41 170.6 156 53.2
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.3e-40 170.2 156 53.2
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.6e-40 169.9 154 53.2
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 1.6e-40 169.9 153 52.9
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 2.1e-40 169.5 156 52.6
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 6.2e-40 167.9 154 54.5
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.4e-39 166.8 158 54.4
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 5.3e-39 164.9 161 49.1
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 6.9e-39 164.5 153 54.9
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 9.0e-39 164.1 153 52.3
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 2.0e-38 162.9 155 51.6
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 5.8e-38 161.4 161 49.7
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 7.6e-38 161.0 153 54.9
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 7.6e-38 161.0 154 53.9
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.3e-37 160.2 143 55.9
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 1.7e-37 159.8 160 48.8
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 2.2e-37 159.5 160 46.9
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 3.8e-37 158.7 153 51.6
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 6.5e-37 157.9 153 49.0
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 8.4e-37 157.5 143 54.5
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 8.4e-37 157.5 127 57.5
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 8.4e-37 157.5 140 55.0
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 1.1e-36 157.1 156 48.7
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 3.2e-36 155.6 160 45.0
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 3.2e-36 155.6 144 55.6
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 3.2e-36 155.6 156 48.1
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 9.3e-36 154.1 135 54.8
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 1.6e-35 153.3 153 46.4
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 3.5e-35 152.1 154 46.8
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 6.0e-35 151.4 154 46.1
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 6.0e-35 151.4 156 46.2
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 6.0e-35 151.4 155 47.1
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 1.0e-34 150.6 157 45.9
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.3e-34 150.2 156 48.7
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 1.8e-34 149.8 156 46.2
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 3.0e-34 149.1 156 48.7
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 3.9e-34 148.7 144 52.8
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 3.9e-34 148.7 154 45.5
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 5.1e-34 148.3 137 54.0
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 5.1e-34 148.3 145 53.8
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 8.7e-34 147.5 165 47.3
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.1e-33 147.1 144 52.1
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 2.5e-33 146.0 156 46.2
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 4.3e-33 145.2 161 45.3
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 9.7e-33 144.1 161 44.7
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 1.3e-32 143.7 155 47.7
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 1.4e-31 140.2 135 52.6
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 1.4e-31 140.2 140 49.3
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 1.4e-31 140.2 138 52.2
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 1.4e-31 140.2 156 47.4
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 2.4e-31 139.4 134 55.2
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 2.4e-31 139.4 157 46.5
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.1e-31 139.0 152 44.1
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.2e-30 137.1 134 54.5
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.2e-30 137.1 150 46.0
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 2.6e-30 136.0 142 51.4
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.7e-29 133.3 129 54.3
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 1.7e-29 133.3 155 41.3
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 2.9e-29 132.5 155 43.2
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 6.5e-29 131.3 155 39.4
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 8.5e-29 131.0 155 42.6
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 1.2e-27 127.1 154 40.9
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 1.6e-27 126.7 141 47.5
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 1.0e-26 124.0 142 46.5
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 1.9e-25 119.8 135 48.1
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 5.7e-25 118.2 169 40.8
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 9.1e-23 110.9 147 40.8
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 2.0e-22 109.8 143 37.8
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 2.1e-19 99.8 140 40.7
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 7.4e-17 91.3 147 35.4
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 7.7e-14 81.3 90 40.0
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 1.9e-12 76.6 92 43.5
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 3.2e-12 75.9 86 45.3


User provided reference genes

Program Settings