Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.8e-61 239.2 131 100.0
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 4.0e-61 238.0 131 99.2
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 2.3e-56 222.2 131 90.1
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 3.3e-55 218.4 129 89.1
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 4.3e-55 218.0 129 89.1
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.6e-54 216.1 131 88.5
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 2.1e-54 215.7 129 87.6
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 4.7e-54 214.5 129 86.8
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 4.7e-54 214.5 131 87.8
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 4.7e-54 214.5 129 86.8
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 6.2e-54 214.2 129 87.6
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 8.1e-54 213.8 130 86.9
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.1e-53 213.4 131 87.0
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.8e-53 212.6 131 84.7
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 1.8e-53 212.6 125 88.8
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 2.3e-53 212.2 129 86.0
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 3.1e-53 211.8 131 86.3
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 5.2e-53 211.1 131 83.2
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 5.2e-53 211.1 131 84.7
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.8e-53 210.7 130 85.4
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 85.5
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 6.8e-53 210.7 131 84.0
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 8.9e-53 210.3 131 84.0
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 8.9e-53 210.3 131 84.0
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 8.9e-53 210.3 131 85.5
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 8.9e-53 210.3 125 88.8
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 1.2e-52 209.9 129 85.3
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.2e-52 209.9 130 85.4
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 1.2e-52 209.9 131 85.5
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 1.5e-52 209.5 131 82.4
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.0e-52 209.1 131 84.0
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 2.6e-52 208.8 130 85.4
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 2.6e-52 208.8 125 88.8
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 2.6e-52 208.8 131 83.2
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 3.4e-52 208.4 131 83.2
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.4e-52 208.0 130 84.6
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.4e-52 208.0 130 84.6
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 5.8e-52 207.6 125 86.4
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 5.8e-52 207.6 129 85.3
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 5.8e-52 207.6 130 84.6
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 7.6e-52 207.2 131 84.7
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 1.3e-51 206.5 131 84.0
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.7e-51 206.1 131 81.7
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 2.2e-51 205.7 131 84.7
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.2e-51 205.7 130 83.8
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.2e-51 205.7 130 84.6
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 2.2e-51 205.7 125 87.2
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 2.2e-51 205.7 131 81.7
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 2.9e-51 205.3 131 84.0
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 3.7e-51 204.9 129 82.2
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 3.7e-51 204.9 124 86.3
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 4.9e-51 204.5 131 81.7
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 4.9e-51 204.5 125 85.6
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 6.4e-51 204.1 130 83.1
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.4e-51 204.1 130 83.8
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 8.4e-51 203.8 127 83.5
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 1.4e-50 203.0 125 85.6
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 1.9e-50 202.6 131 81.7
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 2.4e-50 202.2 131 80.9
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 2.4e-50 202.2 131 80.9
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 2.4e-50 202.2 138 81.2
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 3.2e-50 201.8 131 79.4
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 9.2e-50 200.3 130 84.6
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 2.7e-49 198.7 131 78.6
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 2.7e-49 198.7 131 78.6
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 2.7e-49 198.7 131 78.6
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.7e-49 198.7 130 82.3
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 3.5e-49 198.4 131 80.2
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 1.0e-48 196.8 130 78.5
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 1.0e-48 196.8 131 77.9
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 1.0e-48 196.8 131 77.9
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 1.0e-48 196.8 130 78.5
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 6.6e-48 194.1 136 76.5
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 2.5e-47 192.2 113 86.7
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.6e-47 191.0 129 76.7
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 7.3e-47 190.7 112 91.1
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 7.3e-47 190.7 131 74.0
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 1.2e-46 189.9 131 77.9
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 1.6e-46 189.5 113 86.7
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 2.8e-46 188.7 130 77.7
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 3.6e-46 188.3 122 82.8
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.6e-46 188.3 142 73.9
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 8.1e-46 187.2 129 74.4
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.8e-45 186.0 112 89.3
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 3.4e-44 181.8 110 86.4
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.4e-44 181.8 121 81.0
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 4.4e-44 181.4 111 83.8
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 4.4e-44 181.4 186 58.1
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 7.6e-44 180.6 113 82.3
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 7.6e-44 180.6 124 74.2
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 9.9e-44 180.3 134 73.9
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 2.2e-43 179.1 106 88.7
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.9e-43 178.7 121 79.3
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 4.9e-43 177.9 129 71.3
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 4.2e-42 174.9 108 83.3
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 1.2e-41 173.3 105 86.7
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 1.6e-41 172.9 113 77.9
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 3.5e-41 171.8 107 82.2
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 6.0e-41 171.0 131 73.3
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 7.8e-41 170.6 104 85.6
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 1.0e-40 170.2 122 76.2
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 1.0e-40 170.2 128 74.2
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.7e-40 169.5 105 83.8
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 1.7e-40 169.5 92 97.8
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 2.3e-40 169.1 116 76.7
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 6.6e-40 167.5 105 83.8
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 3.3e-39 165.2 112 76.8
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 4.0e-37 158.3 107 75.7
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 4.0e-37 158.3 92 88.0
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 6.9e-37 157.5 133 66.2
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.5e-36 156.4 122 65.6
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 1.5e-36 156.4 97 83.5
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 2.0e-36 156.0 124 61.3
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 2.6e-36 155.6 160 56.9
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 4.4e-36 154.8 112 73.2
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 4.4e-36 154.8 92 90.2
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 4.4e-36 154.8 130 66.9
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 9.9e-36 153.7 95 87.4
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 9.9e-36 153.7 88 95.5
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 2.2e-35 152.5 92 85.9
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 2.9e-35 152.1 97 81.4
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 8.4e-35 150.6 89 84.3
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 8.4e-35 150.6 117 71.8
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 1.1e-34 150.2 87 86.2
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.9e-34 149.4 84 90.5
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 3.2e-34 148.7 131 56.5
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 3.2e-34 148.7 87 86.2
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.6e-33 146.4 110 65.5
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 2.1e-33 146.0 87 88.5
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 8.7e-32 140.6 131 64.9
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 2.8e-30 135.6 90 76.7
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 1.4e-29 133.3 100 73.0
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 5.8e-28 127.9 95 74.7
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.1e-26 123.6 92 76.1
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.1e-26 123.6 92 76.1
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 1.4e-26 123.2 71 87.3
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 6.7e-24 114.4 70 82.9
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 1.5e-23 113.2 199 43.2
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.1e-22 109.4 61 91.8
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 1.4e-21 106.7 111 60.4
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 3.1e-21 105.5 125 48.0
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 2.0e-20 102.8 63 81.0
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 2.2e-19 99.4 116 44.8
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.1e-18 97.1 67 71.6
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 1.4e-18 96.7 64 75.0
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 4.2e-18 95.1 64 73.4
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 1.2e-17 93.6 83 62.7
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 2.1e-17 92.8 66 71.2
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 4.6e-17 91.7 65 72.3
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 5.1e-16 88.2 65 69.2
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.6e-14 83.2 122 39.3
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 8.2e-14 80.9 173 38.2
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.9e-10 69.7 123 33.3
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 3.0e-08 62.4 119 37.8
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 9.7e-07 57.4 51 60.8


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