Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g004140 Solanum pennellii HOM05D000405 ORTHO05D000974 4.1e-87 324.7 166 100.0
PGSC0003DMG400005836 Solanum tuberosum HOM05D000405 ORTHO05D000974 2.5e-44 182.6 120 79.2
CAN.G792.43 Capsicum annuum HOM05D000405 ORTHO05D000974 1.3e-29 133.7 119 58.8
CAN.G792.42 Capsicum annuum HOM05D000405 ORTHO05D000974 2.0e-25 119.8 116 55.2
Nitab4.5_0002944g0110 Nicotiana tabacum HOM05D000405 ORTHO05D000974 1.3e-21 107.1 161 43.5
Peaxi162Scf00102g01741 Petunia axillaris HOM05D000405 ORTHO05D000974 1.9e-20 103.2 195 37.9
Nitab4.5_0006656g0070 Nicotiana tabacum HOM05D000405 ORTHO05D000974 5.7e-20 101.7 127 51.2
Nitab4.5_0002944g0100 Nicotiana tabacum HOM05D000405 ORTHO05D000974 3.8e-16 89.0 200 37.0
Nitab4.5_0006656g0060 Nicotiana tabacum HOM05D000405 ORTHO05D000974 3.8e-16 89.0 201 36.8
Solyc08g008280.3 Solanum lycopersicum HOM05D000405 ORTHO05D000974 4.2e-15 85.5 200 37.5
Sopen08g004130 Solanum pennellii HOM05D000405 ORTHO05D000974 4.2e-15 85.5 200 37.5
CAN.G792.44 Capsicum annuum HOM05D000405 ORTHO05D000974 1.6e-14 83.6 201 35.8
PGSC0003DMG400005835 Solanum tuberosum HOM05D000405 ORTHO05D000974 1.6e-14 83.6 200 37.0
Nitab4.5_0007099g0040 Nicotiana tabacum HOM05D000405 ORTHO05D000974 1.4e-13 80.5 196 35.2
Peaxi162Scf00074g01125 Petunia axillaris HOM05D000405 ORTHO05D000974 6.7e-13 78.2 195 33.8
CAN.G532.103 Capsicum annuum HOM05D000405 ORTHO05D000974 2.4e-10 69.7 196 31.6
Peaxi162Scf00102g01754 Petunia axillaris HOM05D000405 ORTHO05D000974 6.9e-10 68.2 117 42.7
Nitab4.5_0000223g0340 Nicotiana tabacum HOM05D000405 ORTHO05D000974 1.5e-09 67.0 193 32.6
PGSC0003DMG400012160 Solanum tuberosum HOM05D000405 ORTHO05D000974 1.5e-09 67.0 192 31.8
Sopen08g030400 Solanum pennellii HOM05D000405 ORTHO05D000974 7.7e-09 64.7 193 31.6
Solyc08g082110.4 Solanum lycopersicum HOM05D000405 ORTHO05D000974 1.7e-08 63.5 191 30.9
Duzib133G0492 Durio zibethinus HOM05D000405 ORTHO05D000974 5.0e-08 62.0 199 28.6
Cc08_g15910 Coffea canephora HOM05D000405 ORTHO05D000974 6.5e-08 61.6 182 30.8
GSVIVG01027069001 Vitis vinifera HOM05D000405 ORTHO05D000974 1.1e-07 60.8 158 28.5
TAR636G1663 Trochodendron aralioides HOM05D000405 ORTHO05D000974 1.4e-07 60.5 156 29.5
GSVIVG01019511001 Vitis vinifera HOM05D000405 ORTHO05D000974 1.4e-07 60.5 138 31.9
Dinv32564 Davidia involucrata HOM05D000405 ORTHO05D000974 5.5e-07 58.5 192 28.6
Nn3g19060 Nelumbo nucifera HOM05D000405 ORTHO05D000974 7.2e-07 58.2 159 29.6
Duzib138G1887 Durio zibethinus HOM05D000405 ORTHO05D000974 1.6e-06 57.0 127 34.6
Actinidia22725 Actinidia chinensis HOM05D000405 ORTHO05D000974 3.6e-06 55.8 92 42.4
Thecc.01G345300 Theobroma cacao HOM05D000405 ORTHO05D000974 6.1e-06 55.1 117 35.9
Potri.003G138600 Populus trichocarpa HOM05D000405 ORTHO05D000974 7.9e-06 54.7 185 31.4


User provided reference genes

Program Settings