Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.9e-127 459.1 229 100.0
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 7.6e-124 447.2 229 97.4
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.7e-120 436.0 229 94.8
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 8.7e-104 380.6 233 83.3
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.3e-101 371.3 243 78.2
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 1.3e-99 366.7 225 80.4
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 8.4e-99 364.0 236 77.5
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 1.9e-98 362.8 229 77.7
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 3.9e-96 355.1 229 76.4
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 3.9e-96 355.1 229 76.4
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 5.1e-96 354.8 226 77.4
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 5.1e-96 354.8 229 76.4
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 5.1e-96 354.8 231 76.6
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 6.7e-96 354.4 229 77.3
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 9.7e-95 350.5 241 73.9
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 2.8e-94 349.0 226 76.5
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 3.7e-94 348.6 226 77.0
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 6.3e-94 347.8 227 75.3
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 8.2e-94 347.4 231 76.2
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 1.1e-93 347.1 229 75.5
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.1e-93 347.1 226 77.4
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 1.8e-93 346.3 228 75.0
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 2.4e-93 345.9 226 74.8
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 5.3e-93 344.7 229 75.1
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 1.2e-92 343.6 225 75.6
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 1.5e-92 343.2 224 75.0
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 2.0e-92 342.8 234 74.8
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 2.0e-92 342.8 232 72.8
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 3.4e-92 342.0 178 92.7
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 3.4e-92 342.0 230 75.2
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 4.5e-92 341.7 225 74.7
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 7.7e-92 340.9 230 73.5
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 1.0e-91 340.5 222 76.6
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.3e-91 340.1 229 73.4
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.8e-91 338.6 234 71.8
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 5.0e-91 338.2 222 75.2
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 5.0e-91 338.2 222 74.8
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 5.0e-91 338.2 226 73.9
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 5.0e-91 338.2 228 74.6
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 6.5e-91 337.8 229 73.8
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 6.5e-91 337.8 226 75.2
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 1.4e-90 336.7 233 73.0
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 1.9e-90 336.3 222 75.2
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 2.5e-90 335.9 226 73.5
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 9.4e-90 334.0 228 74.1
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 9.4e-90 334.0 225 72.4
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.2e-89 333.6 228 71.1
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 2.1e-89 332.8 222 74.8
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 2.1e-89 332.8 222 74.8
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 2.1e-89 332.8 222 74.8
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 2.1e-89 332.8 223 74.4
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 3.6e-89 332.0 226 70.8
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 3.6e-89 332.0 228 71.1
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 4.6e-89 331.6 233 70.8
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 6.1e-89 331.3 225 72.4
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 7.9e-89 330.9 222 74.3
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.4e-88 330.1 236 70.8
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.4e-88 330.1 207 76.3
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.0e-88 328.9 233 71.2
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 3.0e-88 328.9 220 75.5
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 3.9e-88 328.6 233 70.4
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 3.9e-88 328.6 228 73.2
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 5.1e-88 328.2 232 71.1
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 1.1e-87 327.0 231 71.0
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 2.0e-87 326.2 233 70.4
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 2.5e-87 325.9 223 74.0
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 3.3e-87 325.5 233 70.0
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 5.7e-87 324.7 294 61.2
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 9.7e-87 323.9 273 63.0
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.3e-86 323.6 228 68.9
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 2.2e-86 322.8 265 64.9
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 3.7e-86 322.0 233 68.2
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.1e-85 320.5 297 59.3
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.8e-85 319.7 237 68.8
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 6.9e-85 317.8 223 72.6
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.2e-84 317.0 240 67.9
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 3.4e-84 315.5 231 69.7
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 3.4e-84 315.5 222 70.3
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 2.9e-83 312.4 229 68.6
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.9e-83 312.4 255 64.3
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.8e-83 312.0 224 71.4
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 1.6e-81 306.6 231 71.0
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 2.1e-81 306.2 242 64.5
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 6.1e-81 304.7 194 74.7
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 3.7e-78 295.4 197 71.6
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 2.4e-77 292.7 231 64.1
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 3.1e-77 292.4 196 74.0
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 2.0e-76 289.7 229 67.2
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 7.2e-74 281.2 225 63.1
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 5.7e-71 271.6 229 60.3
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 5.7e-71 271.6 163 77.9
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 6.3e-70 268.1 245 60.0
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.4e-69 266.9 226 60.6
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 5.3e-69 265.0 188 73.9
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 3.5e-68 262.3 242 57.4
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 5.9e-68 261.5 180 66.7
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 5.9e-68 261.5 380 43.2
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.2e-67 259.6 189 68.3
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 8.5e-67 257.7 184 66.8
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 2.8e-62 242.7 228 57.5
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 2.7e-57 226.1 185 57.3
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.0e-56 224.2 155 75.5
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 6.8e-48 194.9 159 66.0
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 1.5e-47 193.7 225 44.9
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.0e-47 193.4 151 69.5
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 5.2e-40 168.7 164 56.7
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 1.2e-39 167.5 133 69.2
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 1.2e-39 167.5 133 69.2
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 1.3e-35 154.1 138 62.3
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 3.0e-35 152.9 222 38.3
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 8.6e-35 151.4 206 41.7
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 6.8e-32 141.7 149 55.0
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 5.8e-31 138.7 149 54.4
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 9.9e-23 111.3 146 45.2
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 7.1e-21 105.1 82 64.6
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 9.2e-21 104.8 105 59.0
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 2.7e-20 103.2 102 57.8
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.1e-18 97.8 54 77.8
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 2.5e-18 96.7 100 57.0
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 5.6e-18 95.5 97 57.7
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.1e-12 77.0 75 54.7
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 1.1e-10 71.2 48 66.7


User provided reference genes

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