Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 5.4e-119 431.0 220 100.0
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.3e-117 426.4 220 98.2
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 1.6e-115 419.5 220 95.9
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 1.7e-109 399.4 219 88.1
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 1.2e-105 386.7 223 87.0
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 3.4e-105 385.2 221 85.5
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 1.7e-101 372.9 218 84.9
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.1e-76 290.4 217 65.4
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 1.1e-76 290.4 213 64.8
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 6.3e-75 284.6 215 63.3
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 1.1e-74 283.9 216 62.5
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 4.1e-74 282.0 222 61.3
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 1.5e-73 280.0 216 58.8
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.6e-73 279.3 217 62.2
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 2.6e-73 279.3 217 62.2
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 7.6e-73 277.7 217 59.9
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.0e-72 277.3 212 63.2
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 1.3e-72 276.9 215 61.9
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 3.8e-72 275.4 220 60.5
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 8.5e-72 274.2 212 61.3
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 1.1e-71 273.9 217 59.4
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 3.2e-71 272.3 216 59.3
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 3.2e-71 272.3 218 61.0
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 4.2e-71 271.9 220 60.9
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 4.2e-71 271.9 219 61.6
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 4.2e-71 271.9 216 57.9
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 7.2e-71 271.2 212 61.3
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 2.7e-70 269.2 218 60.1
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 3.6e-70 268.9 217 60.4
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 7.9e-70 267.7 213 60.1
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 2.3e-69 266.2 211 61.6
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 3.0e-69 265.8 230 58.3
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 3.9e-69 265.4 218 60.1
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 6.7e-69 264.6 222 59.9
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 1.5e-68 263.5 212 59.4
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 1.5e-68 263.5 217 61.3
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.9e-68 263.1 226 58.0
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.3e-68 261.9 226 57.5
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 4.3e-68 261.9 216 56.9
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 5.7e-68 261.5 226 56.6
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 7.4e-68 261.2 214 60.3
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 9.7e-68 260.8 213 59.6
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 1.6e-67 260.0 221 58.4
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 4.8e-67 258.5 213 60.1
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 4.8e-67 258.5 218 55.0
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 6.3e-67 258.1 220 57.3
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 8.2e-67 257.7 212 58.5
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.8e-66 256.5 226 57.1
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.8e-66 256.5 209 58.9
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.8e-66 256.5 211 57.3
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 2.4e-66 256.1 218 58.3
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 3.1e-66 255.8 219 55.7
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 3.1e-66 255.8 226 57.1
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 5.3e-66 255.0 211 59.7
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 1.5e-65 253.4 225 56.4
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 1.5e-65 253.4 225 56.4
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 2.6e-65 252.7 220 57.3
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 3.4e-65 252.3 215 57.2
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 4.5e-65 251.9 212 59.0
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 5.9e-65 251.5 209 59.3
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 7.7e-65 251.1 212 59.0
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 1.0e-64 250.8 214 57.9
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.0e-64 250.8 237 54.9
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 2.9e-64 249.2 188 62.8
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 3.8e-64 248.8 220 56.8
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 5.0e-64 248.4 211 55.0
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 6.5e-64 248.1 216 56.9
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 8.5e-64 247.7 227 55.5
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.1e-63 247.3 211 56.9
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 1.9e-63 246.5 211 54.5
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 4.2e-63 245.4 227 55.1
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 4.2e-63 245.4 215 54.9
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 4.2e-63 245.4 215 54.9
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 5.5e-63 245.0 211 55.0
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 1.2e-62 243.8 226 55.3
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 1.6e-62 243.4 211 60.2
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.1e-62 243.0 227 55.1
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 3.6e-62 242.3 229 55.5
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 7.9e-62 241.1 211 59.2
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 7.9e-62 241.1 211 59.7
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 7.9e-62 241.1 211 54.0
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 3.0e-61 239.2 213 57.3
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 1.5e-60 236.9 220 57.7
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.5e-60 236.9 207 57.5
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 2.6e-60 236.1 211 56.9
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 3.3e-60 235.7 211 59.7
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 3.3e-60 235.7 211 59.7
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 3.3e-60 235.7 211 59.7
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 5.7e-60 235.0 212 58.0
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 5.7e-60 235.0 222 55.0
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 7.4e-60 234.6 219 58.0
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 1.3e-59 233.8 213 54.9
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 4.8e-59 231.9 213 54.5
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 8.2e-59 231.1 211 58.8
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 1.1e-58 230.7 191 55.5
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 9.1e-58 227.6 275 45.8
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.9e-55 219.9 218 48.2
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 5.5e-55 218.4 215 51.6
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 2.7e-54 216.1 213 49.8
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.6e-54 215.7 211 52.6
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 4.7e-54 215.3 215 52.6
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 8.5e-48 194.5 157 58.6
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 1.6e-46 190.3 214 46.7
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 2.0e-44 183.3 144 59.0
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 4.4e-44 182.2 143 65.0
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 6.3e-43 178.3 139 62.6
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.5e-39 167.2 144 56.2
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 2.1e-38 163.3 145 53.1
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 1.2e-33 147.5 114 60.5
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 3.5e-33 146.0 213 39.0
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 1.6e-30 137.1 115 54.8
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 9.5e-23 111.3 192 35.9
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 9.5e-15 84.7 180 33.3
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 5.8e-12 75.5 98 39.8
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 8.1e-06 55.1 193 27.5


User provided reference genes

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