Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g002670 Solanum pennellii HOM05D002961 ORTHO05D024774 3.8e-31 137.5 67 100.0
PGSC0003DMG400026301 Solanum tuberosum HOM05D002961 ORTHO05D003426 4.2e-30 134.0 67 97.0
Peaxi162Scf00045g00203 Petunia axillaris HOM05D002961 ORTHO05D024774 1.9e-27 125.2 67 89.6
Solyc08g006730.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 2.5e-27 124.8 67 95.5
Peaxi162Scf00045g02037 Petunia axillaris HOM05D002961 ORTHO05D003426 1.3e-26 122.5 68 91.2
CAN.G559.6 Capsicum annuum HOM05D002961 ORTHO05D003426 2.8e-26 121.3 67 86.6
Nitab4.5_0000264g0170 Nicotiana tabacum HOM05D002961 ORTHO05D003426 8.1e-26 119.8 67 85.1
Nitab4.5_0001736g0010 Nicotiana tabacum HOM05D002961 ORTHO05D003426 2.4e-25 118.2 62 90.3
Nitab4.5_0007737g0010 Nicotiana tabacum HOM05D002961 ORTHO05D003426 1.5e-24 115.5 62 87.1
Solyc08g068780.3 Solanum lycopersicum HOM05D002961 ORTHO05D003426 2.0e-24 115.2 65 84.6
Nitab4.5_0000406g0070 Nicotiana tabacum HOM05D002961 ORTHO05D003426 2.6e-24 114.8 62 87.1
Solyc08g068770.3 Solanum lycopersicum HOM05D002961 ORTHO05D003426 2.6e-24 114.8 65 81.5
CAN.G21.46 Capsicum annuum HOM05D002961 ORTHO05D003426 3.4e-24 114.4 62 87.1
CAN.G273.16 Capsicum annuum HOM05D002961 ORTHO05D003426 3.4e-24 114.4 62 87.1
Sopen08g022460 Solanum pennellii HOM05D002961 ORTHO05D003426 3.4e-24 114.4 65 80.0
Sopen08g022490 Solanum pennellii HOM05D002961 ORTHO05D003426 3.4e-24 114.4 65 84.6
Sopen08g022510 Solanum pennellii HOM05D002961 ORTHO05D003426 3.4e-24 114.4 65 84.6
Nitab4.5_0007737g0020 Nicotiana tabacum HOM05D002961 ORTHO05D024774 4.5e-24 114.0 62 87.1
PGSC0003DMG400014770 Solanum tuberosum HOM05D002961 ORTHO05D003426 4.5e-24 114.0 65 83.1
PGSC0003DMG400014772 Solanum tuberosum HOM05D002961 ORTHO05D003426 4.5e-24 114.0 65 83.1
Sopen08g022500 Solanum pennellii HOM05D002961 ORTHO05D003426 5.8e-24 113.6 65 81.5
PGSC0003DMG400014771 Solanum tuberosum HOM05D002961 ORTHO05D003426 9.9e-24 112.8 65 81.5
PGSC0003DMG400014774 Solanum tuberosum HOM05D002961 ORTHO05D003426 1.3e-23 112.5 64 81.2
Solyc08g068790.3 Solanum lycopersicum HOM05D002961 ORTHO05D024774 3.8e-23 110.9 65 78.5
Solyc08g068710.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 4.9e-23 110.5 62 80.6
Solyc08g068730.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 4.9e-23 110.5 62 85.5
Solyc08g068700.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 6.4e-23 110.2 64 78.1
PGSC0003DMG400014776 Solanum tuberosum HOM05D002961 ORTHO05D003426 8.4e-23 109.8 64 76.6
Solyc08g068690.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 1.9e-22 108.6 64 78.1
Sopen08g022440 Solanum pennellii HOM05D002961 ORTHO05D003426 1.9e-22 108.6 64 78.1
Sopen08g022450 Solanum pennellii HOM05D002961 ORTHO05D003426 2.4e-22 108.2 64 76.6
Sopen08g022520 Solanum pennellii HOM05D002961 ORTHO05D003426 4.2e-22 107.5 65 76.9
PGSC0003DMG400014778 Solanum tuberosum HOM05D002961 ORTHO05D003426 5.4e-22 107.1 62 79.0
CAN.G78.9 Capsicum annuum HOM05D002961 ORTHO05D003426 2.7e-21 104.8 62 77.4
CAN.G273.28 Capsicum annuum HOM05D002961 ORTHO05D024774 6.0e-21 103.6 62 80.6
Solyc08g068720.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 1.5e-19 99.0 62 72.6
PGSC0003DMG400014773 Solanum tuberosum HOM05D002961 ORTHO05D003426 1.9e-19 98.6 62 74.2
Nitab4.5_0000406g0090 Nicotiana tabacum HOM05D002961 ORTHO05D286327 3.8e-15 84.3 49 75.5
Nitab4.5_0000052g0120 Nicotiana tabacum HOM05D002961 ORTHO05D003426 1.2e-08 62.8 61 47.5
Dinv00190 Davidia involucrata HOM05D002961 ORTHO05D003426 1.7e-07 58.9 62 40.3
Nitab4.5_0000838g0150 Nicotiana tabacum HOM05D002961 ORTHO05D003426 1.7e-07 58.9 64 40.6
QL08p055207 Quercus lobata HOM05D002961 ORTHO05D003426 2.9e-07 58.2 62 40.3
QL08p055257 Quercus lobata HOM05D002961 ORTHO05D003426 2.9e-07 58.2 62 40.3
CiPaw.01G271000 Carya illinoinensis HOM05D002961 ORTHO05D003426 3.8e-07 57.8 62 40.3
Nitab4.5_0000071g0200 Nicotiana tabacum HOM05D002961 ORTHO05D003426 3.8e-07 57.8 61 44.3
Migut.F01970 Erythranthe guttata HOM05D002961 ORTHO05D003426 4.9e-07 57.4 62 41.9
Solyc10g084640.1 Solanum lycopersicum HOM05D002961 ORTHO05D003426 4.9e-07 57.4 61 41.0
Sopen10g034080 Solanum pennellii HOM05D002961 ORTHO05D003426 4.9e-07 57.4 61 41.0
CANSAT56G0472 Cannabis sativa HOM05D002961 ORTHO05D003426 8.4e-07 56.6 61 42.6
CAN.G1609.10 Capsicum annuum HOM05D002961 ORTHO05D000001 8.4e-07 56.6 65 41.5
CAN.G688.8 Capsicum annuum HOM05D002961 ORTHO05D003426 8.4e-07 56.6 61 41.0
FAN01G0092 Fragaria x ananassa HOM05D002961 ORTHO05D003426 8.4e-07 56.6 60 43.3
Hma1.2p1_0366F.1_g136890 Hydrangea macrophylla HOM05D002961 ORTHO05D003426 8.4e-07 56.6 62 40.3
Nn2g13743 Nelumbo nucifera HOM05D002961 ORTHO05D003426 1.1e-06 56.2 60 43.3
Nitab4.5_0003338g0090 Nicotiana tabacum HOM05D002961 ORTHO05D003426 1.1e-06 56.2 65 41.5
Rhsim03G0118600 Rhododendron simsii HOM05D002961 ORTHO05D003426 1.1e-06 56.2 65 36.9
FvH4_7g19050 Fragaria vesca HOM05D002961 ORTHO05D003426 1.4e-06 55.8 60 41.7
FAN06G3681 Fragaria x ananassa HOM05D002961 ORTHO05D003426 1.4e-06 55.8 60 41.7
FAN06G4372 Fragaria x ananassa HOM05D002961 ORTHO05D003426 1.4e-06 55.8 60 41.7
Nitab4.5_0007307g0010 Nicotiana tabacum HOM05D002961 ORTHO05D003426 1.4e-06 55.8 61 42.6
Actinidia22443 Actinidia chinensis HOM05D002961 ORTHO05D003426 1.9e-06 55.5 60 41.7
Lj3P882T56 Lonicera japonica HOM05D002961 ORTHO05D003426 1.9e-06 55.5 61 41.0
Peaxi162Scf00523g00056 Petunia axillaris HOM05D002961 ORTHO05D003426 1.9e-06 55.5 59 45.8
unitig_749.g13572 Utricularia gibba HOM05D002961 ORTHO05D003426 1.9e-06 55.5 61 42.6
FAN03G0700 Fragaria x ananassa HOM05D002961 ORTHO05D003426 2.5e-06 55.1 60 41.7
FAN10G0478 Fragaria x ananassa HOM05D002961 ORTHO05D003426 2.5e-06 55.1 60 41.7
FAN10G1125 Fragaria x ananassa HOM05D002961 ORTHO05D003426 2.5e-06 55.1 60 41.7
Oeu031329.1 Olea europaea HOM05D002961 ORTHO05D003426 2.5e-06 55.1 62 41.9
Peaxi162Scf01227g00007 Petunia axillaris HOM05D002961 ORTHO05D003426 2.5e-06 55.1 62 38.7
Duzib106G0956 Durio zibethinus HOM05D002961 ORTHO05D003426 3.2e-06 54.7 59 42.4
RcHm_v2.0_Chr1g0362951 Rosa chinensis HOM05D002961 ORTHO05D003426 3.2e-06 54.7 60 41.7
MD01G1105800 Malus domestica HOM05D002961 ORTHO05D003426 4.2e-06 54.3 62 38.7
QL08p055272 Quercus lobata HOM05D002961 ORTHO05D003426 4.2e-06 54.3 62 38.7
HPP92_018616 Vanilla planifolia HOM05D002961 ORTHO05D003426 4.2e-06 54.3 65 40.0
CSS0000191 Camellia sinensis var. sinensis HOM05D002961 ORTHO05D003426 5.5e-06 53.9 59 42.4
Cfa001671 Carpinus fangiana HOM05D002961 ORTHO05D003426 5.5e-06 53.9 61 37.7
Cc02_g11190 Coffea canephora HOM05D002961 ORTHO05D003426 5.5e-06 53.9 61 39.3
THA.LOC104825225 Tarenaya hassleriana HOM05D002961 ORTHO05D003426 5.5e-06 53.9 60 41.7
ECA233G3034 Erigeron canadensis HOM05D002961 ORTHO05D003426 7.1e-06 53.5 62 38.7
PGR142G2276 Punica granatum HOM05D002961 ORTHO05D003426 7.1e-06 53.5 65 35.4
Solyc08g068280.2 Solanum lycopersicum HOM05D002961 ORTHO05D003426 7.1e-06 53.5 64 39.1
Sopen12g032670 Solanum pennellii HOM05D002961 ORTHO05D003426 7.1e-06 53.5 59 42.4
Lsat_1_v5_gn_8_20401 Lactuca sativa HOM05D002961 ORTHO05D003426 9.3e-06 53.1 61 39.3
Lj6g0009968 Lotus japonicus HOM05D002961 ORTHO05D003426 9.3e-06 53.1 59 42.4
Os03g0151600 Oryza sativa ssp. japonica HOM05D002961 ORTHO05D003426 9.3e-06 53.1 60 41.7


User provided reference genes

Program Settings