Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 1.5e-57 226.1 122 100.0
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 7.3e-57 223.8 122 99.2
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 6.2e-48 194.1 122 90.2
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.5e-46 189.5 122 82.8
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 2.0e-46 189.1 119 86.6
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 1.5e-33 146.4 82 98.8
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 5.6e-33 144.4 106 78.3
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 7.3e-33 144.1 108 78.7
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 7.3e-33 144.1 108 78.7
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.2e-32 143.3 108 79.6
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.2e-32 143.3 108 79.6
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.2e-32 143.3 105 81.0
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 3.6e-32 141.7 105 77.1
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 6.2e-32 141.0 106 76.4
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 3.1e-31 138.7 105 78.1
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 4.0e-31 138.3 106 76.4
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 5.2e-31 137.9 106 78.3
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 6.8e-31 137.5 106 73.6
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 8.9e-31 137.1 114 57.9
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 1.2e-30 136.7 107 72.9
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 1.5e-30 136.3 102 75.5
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.5e-30 136.3 106 76.4
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.5e-30 136.3 117 70.1
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.5e-30 136.3 106 75.5
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 1.5e-30 136.3 106 75.5
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.0e-30 136.0 106 77.4
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 2.0e-30 136.0 117 70.1
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 3.4e-30 135.2 102 80.4
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 3.4e-30 135.2 102 78.4
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 4.4e-30 134.8 103 75.7
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 7.6e-30 134.0 106 74.5
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 9.9e-30 133.7 107 72.9
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 9.9e-30 133.7 102 78.4
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.3e-29 133.3 102 77.5
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.3e-29 133.3 117 69.2
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 1.7e-29 132.9 99 75.8
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 2.2e-29 132.5 104 75.0
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 2.9e-29 132.1 98 75.5
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 2.9e-29 132.1 106 73.6
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 3.8e-29 131.7 96 74.0
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 8.4e-29 130.6 112 71.4
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.1e-28 130.2 97 77.3
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 1.1e-28 130.2 102 74.5
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 1.4e-28 129.8 107 67.3
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 2.4e-28 129.0 106 71.7
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 3.2e-28 128.6 102 74.5
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 5.4e-28 127.9 101 75.2
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 5.4e-28 127.9 101 75.2
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 5.4e-28 127.9 101 75.2
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 7.1e-28 127.5 100 77.0
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 9.3e-28 127.1 101 75.2
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 9.3e-28 127.1 101 75.2
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 9.3e-28 127.1 101 75.2
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 9.3e-28 127.1 101 75.2
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 9.3e-28 127.1 103 72.8
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 9.3e-28 127.1 102 74.5
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.2e-27 126.7 107 69.2
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 1.6e-27 126.3 110 67.3
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 1.6e-27 126.3 105 70.5
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.6e-27 126.3 101 74.3
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.1e-27 125.9 96 72.9
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.1e-27 125.9 96 72.9
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 2.1e-27 125.9 109 67.0
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.1e-27 125.9 106 72.6
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 2.7e-27 125.6 97 76.3
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 2.7e-27 125.6 80 70.0
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 2.7e-27 125.6 97 76.3
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.7e-27 125.6 107 72.9
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 2.7e-27 125.6 99 74.7
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 3.5e-27 125.2 106 69.8
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 4.6e-27 124.8 106 67.9
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 4.6e-27 124.8 101 72.3
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 4.6e-27 124.8 93 76.3
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 4.6e-27 124.8 106 69.8
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 7.8e-27 124.0 114 67.5
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 7.8e-27 124.0 97 74.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 1.0e-26 123.6 108 70.4
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 1.3e-26 123.2 105 69.5
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 1.3e-26 123.2 106 68.9
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.3e-26 123.2 93 75.3
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 2.3e-26 122.5 101 70.3
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 3.0e-26 122.1 97 77.3
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 3.9e-26 121.7 96 71.9
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 6.6e-26 120.9 105 68.6
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 6.6e-26 120.9 98 74.5
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 6.6e-26 120.9 99 71.7
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 6.6e-26 120.9 98 71.4
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 1.1e-25 120.2 118 64.4
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.5e-25 119.8 95 70.5
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 3.3e-25 118.6 98 71.4
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 4.3e-25 118.2 109 66.1
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 4.3e-25 118.2 99 70.7
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 9.6e-25 117.1 100 70.0
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 1.6e-24 116.3 102 69.6
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.1e-23 113.6 89 74.2
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 9.0e-23 110.5 92 68.5
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 9.0e-23 110.5 76 64.5
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 1.2e-22 110.2 94 66.0
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.2e-22 110.2 97 67.0
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 1.5e-22 109.8 143 55.9
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 3.4e-22 108.6 113 58.4
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 8.4e-21 104.0 79 77.2
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 1.4e-20 103.2 75 80.0
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 2.4e-20 102.4 83 68.7
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.5e-09 66.6 50 60.0


User provided reference genes

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