Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 5.3e-254 880.6 452 100.0
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 6.9e-246 853.6 452 97.1
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 5.1e-241 837.4 455 95.2
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.4e-222 776.2 454 88.5
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 1.0e-220 770.0 455 88.1
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.2e-218 763.1 440 88.4
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.3e-212 743.0 454 85.7
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.4e-208 728.0 500 79.2
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 3.6e-202 708.4 446 81.8
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.8e-201 706.1 454 81.3
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.7e-199 698.4 447 81.0
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 7.8e-197 690.6 454 79.3
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.1e-195 686.8 436 82.1
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 6.4e-191 671.0 461 78.3
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 8.3e-191 670.6 453 77.5
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 1.0e-180 637.1 450 74.7
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 5.1e-180 634.8 450 74.4
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 6.6e-180 634.4 455 74.7
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.6e-176 622.5 430 75.6
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 6.4e-175 617.8 454 72.0
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 2.4e-174 615.9 445 72.4
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.5e-168 596.7 425 72.9
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 2.7e-165 585.9 419 73.3
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.7e-164 583.2 433 70.4
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 1.5e-163 580.1 444 69.6
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.6e-162 576.6 430 70.9
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 4.8e-162 575.1 370 78.6
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 8.1e-162 574.3 403 74.4
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 3.1e-161 572.4 394 75.1
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 4.0e-161 572.0 420 71.0
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 1.2e-160 570.5 404 72.3
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 1.5e-160 570.1 374 79.9
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 2.0e-160 569.7 374 80.2
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 4.5e-160 568.5 451 67.2
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.5e-160 568.5 397 74.1
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.2e-159 566.2 433 69.7
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 4.9e-159 565.1 394 73.9
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.4e-158 563.5 391 73.9
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 2.4e-158 562.8 450 68.0
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.7e-157 559.3 396 72.7
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 2.7e-157 559.3 378 74.9
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 6.0e-157 558.1 439 67.7
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.3e-156 557.0 413 70.9
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 1.3e-156 557.0 422 69.4
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 5.1e-156 555.1 434 68.2
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.1e-155 553.9 379 76.5
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 1.5e-155 553.5 388 72.4
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 4.3e-155 552.0 414 69.6
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 4.3e-155 552.0 467 64.0
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 9.6e-155 550.8 382 74.1
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 1.3e-154 550.4 372 73.9
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.1e-153 547.4 410 68.8
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.1e-153 547.4 448 65.8
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 5.3e-153 545.0 418 68.4
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 2.0e-152 543.1 418 68.2
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 2.0e-152 543.1 401 70.8
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 3.4e-152 542.3 360 76.9
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.3e-151 540.4 378 73.3
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.3e-151 540.4 418 67.5
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.7e-151 540.0 401 70.3
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.9e-151 539.3 378 73.5
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 6.4e-151 538.1 465 61.7
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 8.4e-151 537.7 410 68.0
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 8.4e-151 537.7 418 67.7
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.4e-150 537.0 408 69.4
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 4.6e-149 531.9 432 65.7
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 6.0e-149 531.6 413 69.2
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 7.9e-149 531.2 390 71.0
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.3e-148 529.6 418 68.7
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.3e-148 529.6 421 67.2
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 5.1e-148 528.5 408 69.4
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.9e-147 526.6 442 63.3
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 2.1e-146 523.1 399 69.2
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 4.8e-146 521.9 424 66.3
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 1.2e-141 507.3 470 59.6
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 1.6e-141 506.9 400 67.5
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 6.0e-141 505.0 381 68.5
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 1.3e-140 503.8 372 71.5
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 1.1e-139 500.7 372 69.1
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.3e-138 497.3 331 75.5
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.6e-138 496.9 331 75.5
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 2.2e-130 469.9 390 65.6
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 6.9e-129 464.9 405 60.2
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.3e-127 460.7 425 60.0
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 1.4e-126 457.2 370 63.5
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 1.4e-124 450.7 386 61.9
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 3.9e-124 449.1 413 56.7
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.0e-123 446.8 454 55.9
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 8.5e-119 431.4 337 67.7
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 3.2e-118 429.5 443 56.0
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 5.7e-115 418.7 383 60.8
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 5.7e-115 418.7 460 53.5
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 1.8e-113 413.7 360 64.7
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.2e-112 411.0 375 61.1
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 1.2e-112 411.0 389 59.9
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 1.6e-112 410.6 450 54.0
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 5.9e-112 408.7 376 61.2
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 5.9e-112 408.7 376 61.2
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 2.2e-111 406.8 400 57.8
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 4.2e-102 375.9 386 56.0
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 4.2e-102 375.9 386 56.0
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 2.3e-100 370.2 375 55.7
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 2.6e-99 366.7 394 53.6
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 4.4e-99 365.9 372 56.2
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 4.4e-99 365.9 372 56.2
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 5.2e-92 342.4 324 58.6
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 5.6e-86 322.4 239 71.1
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.6e-86 322.4 235 69.8
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 4.9e-66 256.1 362 40.9
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 6.4e-58 229.2 159 74.8
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 2.5e-54 217.2 139 77.7
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 1.5e-51 208.0 385 36.4
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.0e-51 207.6 398 33.9
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 8.4e-50 202.2 417 38.6
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 4.3e-46 189.9 152 61.8
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 3.1e-44 183.7 396 37.9
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 2.6e-43 180.6 147 63.9
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 2.6e-43 180.6 404 34.9
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 6.4e-42 176.0 126 70.6
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.3e-37 161.8 107 74.8
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 2.9e-34 150.6 122 62.3
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 7.1e-33 146.0 195 46.2
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.1e-25 122.1 308 29.2
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 2.1e-24 117.9 126 54.0
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 3.7e-21 107.1 77 68.8
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 6.5e-18 96.3 81 63.0
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 3.8e-10 70.5 48 68.8
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 1.4e-09 68.6 412 25.2
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 1.9e-09 68.2 236 25.8
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.4e-07 62.0 290 25.9
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 3.9e-07 60.5 403 24.1
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 6.7e-07 59.7 421 23.3
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 8.8e-07 59.3 58 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 8.8e-07 59.3 412 21.8
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 2.0e-06 58.2 411 23.4
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 2.0e-06 58.2 411 23.1
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 5.7e-06 56.6 273 23.8
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 7.4e-06 56.2 351 22.2


User provided reference genes

Program Settings