Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 7.8e-78 294.3 217 100.0
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 2.3e-69 266.2 217 86.6
Nitab4.5_0002539g0010 Nicotiana tabacum HOM05D023668 ORTHO05D009793 3.1e-50 202.6 250 68.4
Nitab4.5_0000804g0140 Nicotiana tabacum HOM05D023668 ORTHO05D009793 6.4e-48 194.9 261 67.0
Peaxi162Scf00045g00004 Petunia axillaris HOM05D023668 ORTHO05D009793 4.2e-39 165.6 217 71.0
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 3.8e-16 89.4 224 33.0
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 8.2e-11 71.6 209 30.1
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 1.1e-10 71.2 197 31.5
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.8e-10 70.5 213 27.7
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.8e-10 70.5 213 27.7
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 3.1e-10 69.7 216 28.7
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 5.3e-10 68.9 217 28.6
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 5.3e-10 68.9 213 30.5
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 6.9e-10 68.6 213 30.5
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 9.1e-10 68.2 198 29.8
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 2.0e-09 67.0 211 29.9
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 2.6e-09 66.6 216 26.9
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 3.4e-09 66.2 211 29.9
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 4.5e-09 65.9 210 28.6
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 5.9e-09 65.5 211 29.9
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 7.7e-09 65.1 211 28.4
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 1.3e-08 64.3 209 29.2
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 1.3e-08 64.3 219 29.2
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 1.7e-08 63.9 217 26.3
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 2.2e-08 63.5 222 26.6
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 2.9e-08 63.2 196 29.6
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 5.0e-08 62.4 219 28.3
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 6.5e-08 62.0 210 29.0
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 8.5e-08 61.6 200 29.0
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.9e-07 60.5 212 26.9
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 2.5e-07 60.1 199 28.1
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 3.2e-07 59.7 198 24.7
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 4.2e-07 59.3 209 26.8
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 4.2e-07 59.3 201 28.9
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 4.2e-07 59.3 213 29.1
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 9.4e-07 58.2 208 29.8
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 9.4e-07 58.2 208 38.5
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 9.4e-07 58.2 217 28.1
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 1.2e-06 57.8 164 29.9
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 1.2e-06 57.8 202 30.7
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.6e-06 57.4 202 30.2
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 1.6e-06 57.4 208 27.9
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 1.6e-06 57.4 92 37.0
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 2.1e-06 57.0 208 26.4
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 2.7e-06 56.6 208 30.3
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 7.9e-06 55.1 220 28.2
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 7.9e-06 55.1 93 37.6
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 7.9e-06 55.1 204 31.4


User provided reference genes

Program Settings