Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 8.2e-283 976.5 521 100.0
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 6.7e-269 930.2 512 97.3
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 8.0e-254 880.2 516 91.9
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 3.1e-205 718.8 525 76.0
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 7.6e-204 714.1 525 76.0
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 1.3e-195 686.8 516 74.2
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 1.4e-170 603.6 434 79.3
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 1.2e-116 424.5 544 48.7
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 2.8e-113 413.3 547 48.4
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 2.9e-110 403.3 516 50.0
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 6.4e-110 402.1 525 48.4
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 1.6e-108 397.5 540 46.3
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 5.0e-107 392.5 539 45.5
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 1.9e-106 390.6 538 46.5
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 7.3e-106 388.7 543 45.9
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 8.0e-105 385.2 535 46.2
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 1.4e-104 384.4 531 45.8
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 1.8e-104 384.0 522 47.5
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 1.2e-103 381.3 530 45.1
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 2.2e-102 377.1 503 46.7
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 4.9e-102 375.9 523 45.3
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 2.4e-101 373.6 514 47.7
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 4.1e-101 372.9 514 47.5
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 1.7e-99 367.5 518 45.0
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 5.1e-99 365.9 513 45.8
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.3e-98 363.2 513 45.2
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 7.3e-98 362.1 514 45.3
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.6e-97 359.8 513 44.8
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 1.8e-96 357.5 522 45.2
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 2.3e-96 357.1 521 45.3
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 6.8e-96 355.5 525 44.6
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 6.8e-96 355.5 552 43.3
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 1.3e-94 351.3 514 42.8
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 2.2e-94 350.5 540 43.0
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 1.7e-91 340.9 517 44.7
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.3e-91 340.5 500 43.6
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 3.0e-91 340.1 518 44.2
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 3.3e-90 336.7 541 41.4
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 7.3e-90 335.5 539 41.7
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 3.6e-89 333.2 523 43.4
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 8.9e-88 328.6 528 41.9
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 1.2e-87 328.2 469 47.3
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.5e-87 327.8 540 39.8
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 2.0e-87 327.4 524 40.5
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 4.4e-87 326.2 499 43.1
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 7.6e-87 325.5 521 41.3
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 7.6e-87 325.5 522 41.0
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 2.9e-86 323.6 514 43.0
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 1.1e-85 321.6 540 39.4
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 9.3e-85 318.5 527 41.4
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 2.1e-84 317.4 518 41.7
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 2.1e-84 317.4 522 40.2
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 3.0e-83 313.5 436 46.6
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 2.5e-82 310.5 518 40.3
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 3.3e-82 310.1 540 38.5
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 1.1e-80 305.1 510 40.0
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 4.0e-80 303.1 513 39.0
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 1.7e-78 297.7 550 37.8
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 8.4e-78 295.4 518 37.8
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 1.1e-77 295.0 515 38.6
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 1.2e-76 291.6 530 38.3
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 1.0e-75 288.5 463 42.5
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 1.1e-72 278.5 449 43.4
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 7.6e-71 272.3 516 37.2
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 7.6e-71 272.3 516 37.2
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 2.7e-68 263.8 506 37.0
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 1.0e-67 261.9 513 36.8
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 3.9e-67 260.0 435 41.6
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 5.1e-67 259.6 522 35.2
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 7.4e-66 255.8 465 37.0
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 4.0e-64 250.0 517 36.6
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.5e-63 248.1 602 31.1
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 3.2e-61 240.4 243 56.8
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 6.0e-60 236.1 262 50.8
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 1.8e-59 234.6 277 48.4
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 8.7e-59 232.3 353 43.6
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 1.1e-58 231.9 474 34.6
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 1.1e-58 231.9 262 50.4
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 3.3e-58 230.3 422 37.4
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 3.7e-57 226.9 433 36.5
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 8.2e-57 225.7 271 48.7
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 1.1e-56 225.3 358 40.8
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 1.4e-56 224.9 427 37.0
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 7.6e-55 219.2 343 42.3
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.0e-54 218.8 275 45.5
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 8.4e-54 215.7 359 40.7
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 7.2e-53 212.6 337 42.1
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.8e-51 208.0 243 50.2
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 1.1e-50 205.3 276 44.2
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 2.2e-49 201.1 441 32.9
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 3.2e-45 187.2 146 67.8
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 4.8e-41 173.3 283 38.9
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 8.2e-41 172.6 592 26.7
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 1.8e-40 171.4 283 38.5
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 1.2e-39 168.7 610 26.9
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 9.1e-32 142.5 242 36.0
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 2.6e-31 141.0 195 45.1
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 8.0e-28 129.4 372 29.8
HPP92_017877 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.3e-22 112.1 115 52.2
QL08p003251 Quercus lobata HOM05D007278 ORTHO05D009280 1.4e-19 102.1 88 58.0
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 5.4e-16 90.1 80 56.2
SEGI_34890 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 2.9e-14 84.3 132 38.6
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 6.5e-14 83.2 66 57.6
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 1.3e-09 68.9 165 35.8
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.8e-08 65.1 55 56.4
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 4.5e-07 60.5 71 46.5


User provided reference genes

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