Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 1.3e-58 229.6 116 100.0
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.5e-56 222.6 113 99.1
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 1.5e-56 222.6 116 96.6
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 2.6e-48 195.3 114 86.8
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 5.9e-48 194.1 114 87.7
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 6.5e-47 190.7 113 86.7
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 3.2e-46 188.3 109 86.2
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 3.2e-46 188.3 114 83.3
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 3.7e-42 174.9 114 78.1
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 7.7e-40 167.2 109 76.1
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 1.9e-38 162.5 114 70.2
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 9.7e-35 150.2 114 68.4
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 9.7e-35 150.2 114 68.4
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 4.8e-34 147.9 115 66.1
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 1.4e-33 146.4 112 67.9
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 5.3e-33 144.4 102 69.6
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 7.0e-33 144.1 114 64.9
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 7.0e-33 144.1 111 65.8
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 7.0e-33 144.1 102 69.6
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 9.1e-33 143.7 114 65.8
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 1.2e-32 143.3 111 64.0
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 1.2e-32 143.3 114 64.9
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 1.2e-32 143.3 116 65.5
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 1.5e-32 142.9 106 67.9
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 1.5e-32 142.9 112 62.5
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 2.0e-32 142.5 101 69.3
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 2.0e-32 142.5 104 67.3
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 2.6e-32 142.1 105 65.7
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 3.5e-32 141.7 114 63.2
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 4.5e-32 141.4 114 64.0
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 4.5e-32 141.4 114 65.8
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 4.5e-32 141.4 102 65.7
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 5.9e-32 141.0 114 64.9
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 5.9e-32 141.0 114 64.9
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 5.9e-32 141.0 102 69.6
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 7.7e-32 140.6 114 64.0
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 7.7e-32 140.6 102 69.6
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 1.0e-31 140.2 116 62.9
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 1.0e-31 140.2 116 62.9
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 2.2e-31 139.0 102 68.6
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 2.2e-31 139.0 101 68.3
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 3.8e-31 138.3 105 64.8
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 3.8e-31 138.3 102 66.7
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 5.0e-31 137.9 102 68.6
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 5.0e-31 137.9 101 69.3
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 5.0e-31 137.9 105 65.7
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 6.5e-31 137.5 102 69.6
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 6.5e-31 137.5 114 64.0
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 6.5e-31 137.5 114 61.4
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 6.5e-31 137.5 102 67.6
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 6.5e-31 137.5 102 66.7
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 6.5e-31 137.5 103 67.0
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 8.5e-31 137.1 114 60.5
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 8.5e-31 137.1 101 69.3
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 8.5e-31 137.1 105 63.8
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.1e-30 136.7 102 66.7
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 1.1e-30 136.7 105 65.7
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 1.1e-30 136.7 102 66.7
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 1.5e-30 136.3 102 66.7
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.5e-30 136.3 102 66.7
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 1.5e-30 136.3 111 64.0
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.9e-30 136.0 111 63.1
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 1.9e-30 136.0 102 64.7
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 2.5e-30 135.6 102 67.6
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 2.5e-30 135.6 102 65.7
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 3.2e-30 135.2 102 67.6
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 3.2e-30 135.2 111 61.3
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 3.2e-30 135.2 102 66.7
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 4.2e-30 134.8 112 63.4
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 5.5e-30 134.4 101 64.4
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 5.5e-30 134.4 101 68.3
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 5.5e-30 134.4 140 55.0
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 7.2e-30 134.0 114 63.2
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 1.2e-29 133.3 102 64.7
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 1.2e-29 133.3 102 63.7
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 1.2e-29 133.3 102 64.7
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 1.2e-29 133.3 102 66.7
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 1.6e-29 132.9 102 63.7
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 1.6e-29 132.9 102 65.7
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 1.6e-29 132.9 102 65.7
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 1.6e-29 132.9 102 65.7
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 1.6e-29 132.9 114 61.4
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 1.6e-29 132.9 105 61.9
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 2.1e-29 132.5 114 63.2
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 2.7e-29 132.1 102 64.7
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 2.7e-29 132.1 101 66.3
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 2.7e-29 132.1 132 56.1
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 3.6e-29 131.7 105 62.9
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 3.6e-29 131.7 105 61.9
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 3.6e-29 131.7 106 63.2
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 3.6e-29 131.7 106 63.2
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 4.7e-29 131.3 116 59.5
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 6.1e-29 131.0 102 63.7
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 6.1e-29 131.0 102 65.7
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 1.0e-28 130.2 102 61.8
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.0e-28 130.2 106 62.3
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.0e-28 130.2 106 62.3
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 1.4e-28 129.8 100 64.0
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 1.4e-28 129.8 99 65.7
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 1.4e-28 129.8 102 67.6
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.4e-28 129.8 98 67.3
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 2.3e-28 129.0 105 59.0
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 2.3e-28 129.0 107 61.7
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 1.1e-27 126.7 107 60.7
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 1.1e-27 126.7 107 60.7
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 1.1e-27 126.7 102 61.8
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 1.1e-27 126.7 102 60.8
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 1.5e-27 126.3 112 58.9
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.5e-27 126.3 101 61.4
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 4.4e-27 124.8 104 59.6
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 7.4e-27 124.0 117 56.4
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 7.4e-27 124.0 102 61.8
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 9.7e-27 123.6 106 56.6
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 2.2e-26 122.5 102 57.8
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 2.8e-26 122.1 102 60.8
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 2.0e-24 115.9 102 57.8
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 8.5e-23 110.5 106 54.7
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 1.1e-22 110.2 106 53.8
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 3.2e-22 108.6 103 56.3
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 3.7e-18 95.1 86 57.0
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 4.8e-18 94.7 73 64.4
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 1.2e-16 90.1 62 64.5
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 3.5e-16 88.6 98 45.9
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 5.9e-16 87.8 106 45.3
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 6.5e-15 84.3 102 44.1
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 5.5e-14 81.3 102 40.2
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 9.4e-14 80.5 78 51.3
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 1.6e-13 79.7 82 53.7
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 2.1e-13 79.3 69 56.5
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 8.0e-13 77.4 66 60.6
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 8.0e-13 77.4 80 52.5
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 1.7e-10 69.7 68 54.4
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 6.3e-10 67.8 89 46.1
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 9.1e-09 63.9 85 44.7
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 4.5e-08 61.6 102 40.2
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 5.5e-06 54.7 106 33.0


User provided reference genes

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