Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 4.6e-289 997.3 530 100.0
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 8.0e-286 986.5 530 98.7
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 5.2e-277 957.2 547 94.7
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 1.8e-253 879.0 539 86.1
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 2.1e-241 839.0 543 81.8
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 7.4e-239 830.5 543 82.1
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 7.6e-228 793.9 467 88.0
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 5.5e-210 734.6 531 70.6
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.7e-209 732.3 531 70.1
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 1.2e-204 716.8 464 75.0
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 1.7e-203 713.0 467 74.3
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 5.5e-202 708.0 513 69.6
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 1.2e-201 706.8 460 75.7
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 8.0e-201 704.1 459 75.4
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 2.3e-200 702.6 495 70.7
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 3.0e-200 702.2 538 66.0
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 4.0e-200 701.8 519 69.2
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 6.7e-200 701.0 527 67.7
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 1.5e-199 699.9 459 75.4
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 1.5e-199 699.9 524 67.6
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 2.0e-199 699.5 460 74.8
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 4.4e-199 698.4 460 75.7
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 5.7e-199 698.0 467 74.1
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 5.7e-199 698.0 522 69.0
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 1.3e-198 696.8 460 74.6
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 1.4e-197 693.3 464 73.5
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 1.4e-197 693.3 463 73.9
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 1.4e-197 693.3 543 65.9
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 3.1e-197 692.2 530 67.2
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 3.5e-196 688.7 467 71.7
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 1.0e-195 687.2 522 66.9
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 1.0e-195 687.2 516 67.8
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 1.3e-195 686.8 518 67.0
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.7e-195 686.4 518 66.8
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 6.5e-195 684.5 515 66.6
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 6.5e-195 684.5 467 73.0
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 1.1e-194 683.7 458 73.1
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 1.1e-194 683.7 527 66.6
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 1.5e-194 683.3 465 72.5
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 4.2e-194 681.8 460 73.0
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 5.5e-194 681.4 533 64.7
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 1.0e-192 677.2 459 73.0
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 1.0e-192 677.2 530 63.8
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 2.3e-192 676.0 459 72.3
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 2.3e-192 676.0 465 69.9
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 5.2e-192 674.9 460 72.4
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 1.5e-191 673.3 460 71.3
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 2.0e-191 672.9 539 64.7
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.4e-191 672.2 521 65.5
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 1.3e-190 670.2 459 71.7
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 2.2e-190 669.5 495 69.7
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 4.1e-189 665.2 459 71.9
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 4.1e-189 665.2 480 69.4
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 5.4e-189 664.8 443 73.1
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 9.1e-189 664.1 460 71.3
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 2.7e-188 662.5 457 71.1
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 3.8e-187 658.7 467 69.2
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.1e-186 657.1 467 69.4
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 1.1e-186 657.1 522 64.0
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 9.5e-186 654.1 460 67.8
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 1.6e-185 653.3 469 69.9
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 1.6e-185 653.3 460 69.8
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 2.3e-184 649.4 460 69.3
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 3.0e-184 649.0 469 69.3
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 6.8e-184 647.9 465 68.0
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 8.8e-184 647.5 467 69.0
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 5.7e-183 644.8 457 69.6
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 1.3e-182 643.7 460 68.9
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 1.7e-182 643.3 530 62.5
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 3.7e-182 642.1 460 69.8
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 4.9e-182 641.7 469 68.7
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 6.3e-182 641.3 530 62.6
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 1.4e-181 640.2 473 67.9
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 1.2e-180 637.1 462 68.8
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 1.6e-180 636.7 495 64.0
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 4.5e-180 635.2 440 71.6
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 1.1e-178 630.6 529 61.6
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 1.9e-178 629.8 496 64.7
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 4.7e-177 625.2 464 66.6
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 3.0e-176 622.5 459 68.2
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 4.0e-176 622.1 526 60.5
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 8.9e-176 620.9 536 62.7
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 1.7e-171 606.7 523 59.8
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 1.9e-170 603.2 523 59.5
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.5e-170 602.8 467 65.5
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 2.8e-169 599.4 436 68.1
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 3.6e-169 599.0 472 61.7
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 1.4e-168 597.0 492 61.6
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 1.4e-168 597.0 436 68.1
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 6.6e-163 578.2 518 57.9
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 1.5e-162 577.0 460 63.9
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 4.7e-161 572.0 443 63.4
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.6e-159 566.2 498 58.0
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 2.9e-158 562.8 453 60.0
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 4.0e-152 542.3 488 59.8
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 2.8e-145 519.6 373 71.8
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 6.9e-144 515.0 527 54.8
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 1.2e-143 514.2 405 62.7
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 2.8e-137 493.0 355 66.8
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 1.9e-133 480.3 451 50.3
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 9.9e-127 458.0 364 60.2
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.3e-126 457.6 454 50.2
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 5.6e-122 442.2 356 61.5
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 1.6e-121 440.7 455 49.2
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 2.1e-121 440.3 459 48.1
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 1.5e-119 434.1 458 46.9
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 2.0e-111 407.1 452 46.5
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.0e-107 393.3 308 63.3
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 1.3e-105 387.9 439 43.7
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 2.2e-73 280.8 453 35.3
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 7.5e-66 255.8 425 34.1
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 2.1e-52 211.1 134 76.1
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 3.2e-48 197.2 385 38.4
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 5.0e-46 189.9 134 66.4
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 1.1e-45 188.7 137 65.0
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 2.1e-36 157.9 214 39.7
TAR720G0004 Trochodendron aralioides HOM05D006019 ORTHO05D007900 4.7e-36 156.8 107 72.9
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 1.3e-33 148.7 443 27.1
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 3.4e-26 124.0 92 66.3
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 3.5e-23 114.0 93 63.4
CDE04G2936 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 3.0e-22 110.9 68 82.4
Hma1.2p1_4091F.1_g338270 Hydrangea macrophylla HOM05D006019 ORTHO05D007900 3.9e-22 110.5 114 58.8
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 4.3e-21 107.1 220 35.9
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 7.3e-21 106.3 195 36.9
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 2.0e-18 98.2 208 32.7
C09p45760 Brassica napus HOM05D006019 ORTHO05D007900 2.9e-17 94.4 119 52.1
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 2.1e-12 78.2 505 22.8
BcaC04g20257 Brassica carinata HOM05D006019 ORTHO05D007900 2.8e-12 77.8 79 58.2
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 1.5e-10 72.0 51 60.8


User provided reference genes

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