Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 2.8e-64 248.4 122 100.0
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 1.0e-63 246.5 122 99.2
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 9.8e-62 240.0 122 96.7
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 7.0e-60 233.8 122 94.3
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.0e-58 229.9 122 91.0
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 3.9e-58 228.0 122 90.2
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 5.0e-58 227.6 122 89.3
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 1.1e-57 226.5 122 90.2
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 1.1e-57 226.5 120 91.7
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 1.5e-57 226.1 122 90.2
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.5e-57 226.1 120 90.0
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 1.5e-57 226.1 122 90.2
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.5e-57 226.1 120 91.7
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.9e-57 225.7 122 90.2
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.9e-57 225.7 122 90.2
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 3.3e-57 224.9 120 90.0
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 3.3e-57 224.9 122 88.5
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 5.6e-57 224.2 122 89.3
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 7.3e-57 223.8 122 88.5
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 7.3e-57 223.8 122 88.5
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 9.5e-57 223.4 122 90.2
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.6e-56 222.6 120 90.0
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 1.6e-56 222.6 122 88.5
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 1.6e-56 222.6 122 87.7
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.1e-56 222.2 120 90.0
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.1e-56 222.2 122 87.7
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 2.1e-56 222.2 122 87.7
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 3.6e-56 221.5 122 87.7
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 3.6e-56 221.5 122 86.9
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 3.6e-56 221.5 120 88.3
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 3.6e-56 221.5 122 88.5
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 4.7e-56 221.1 122 88.5
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 4.7e-56 221.1 122 88.5
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 4.7e-56 221.1 122 87.7
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 6.1e-56 220.7 122 86.9
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 8.0e-56 220.3 122 88.5
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.0e-55 219.9 122 86.9
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 1.8e-55 219.2 120 89.2
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.8e-55 219.2 122 87.7
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 1.8e-55 219.2 121 88.4
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 1.8e-55 219.2 122 85.2
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.8e-55 219.2 122 86.1
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 2.3e-55 218.8 122 86.9
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 2.3e-55 218.8 122 86.9
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 2.3e-55 218.8 122 86.1
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 3.1e-55 218.4 122 85.2
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 4.0e-55 218.0 122 86.1
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 5.2e-55 217.6 122 86.9
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 6.8e-55 217.2 122 86.9
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 6.8e-55 217.2 122 85.2
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 6.8e-55 217.2 122 86.1
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 6.8e-55 217.2 120 88.3
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 8.9e-55 216.9 122 86.9
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 8.9e-55 216.9 122 85.2
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 1.2e-54 216.5 122 86.9
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 1.2e-54 216.5 122 86.1
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.2e-54 216.5 122 85.2
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 1.5e-54 216.1 122 85.2
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 1.5e-54 216.1 122 86.1
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 1.5e-54 216.1 122 84.4
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 2.0e-54 215.7 122 86.1
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 2.6e-54 215.3 120 88.3
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 2.6e-54 215.3 122 85.2
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 3.4e-54 214.9 122 85.2
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 3.4e-54 214.9 121 84.3
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 3.4e-54 214.9 122 86.1
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 4.4e-54 214.5 122 86.1
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 4.4e-54 214.5 122 83.6
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 4.4e-54 214.5 122 85.2
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 7.5e-54 213.8 122 86.1
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 7.5e-54 213.8 122 84.4
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 1.3e-53 213.0 122 84.4
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.3e-53 213.0 122 83.6
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 1.3e-53 213.0 122 84.4
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 1.7e-53 212.6 120 85.0
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 2.2e-53 212.2 120 84.2
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 2.9e-53 211.8 122 87.7
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 3.7e-53 211.5 120 85.8
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 3.7e-53 211.5 122 83.6
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 4.9e-53 211.1 122 83.6
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 3.2e-52 208.4 120 83.3
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 3.2e-52 208.4 117 86.3
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 4.1e-52 208.0 122 82.0
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 7.0e-52 207.2 122 81.1
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.6e-51 206.1 122 81.1
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.0e-50 203.4 122 80.3
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 1.3e-50 203.0 157 67.5
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.3e-50 203.0 122 80.3
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.7e-50 202.6 120 80.0
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 1.7e-50 202.6 122 79.5
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 2.3e-50 202.2 158 67.7
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 2.3e-50 202.2 173 63.6
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.1e-49 199.9 134 78.4
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.5e-49 199.5 122 76.2
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 1.5e-49 199.5 122 78.7
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 5.8e-46 187.6 122 73.0
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 7.1e-44 180.6 99 88.9
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 2.7e-43 178.7 122 73.8
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 4.6e-43 177.9 122 67.2
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 1.0e-42 176.8 122 68.9
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.1e-41 173.3 122 66.4
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.1e-41 173.3 122 67.2
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 2.5e-41 172.2 122 65.6
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 6.2e-40 167.5 106 74.5
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 6.6e-34 147.5 165 53.9
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.8e-31 139.4 79 86.1
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 4.0e-31 138.3 78 83.3
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 1.2e-30 136.7 78 83.3
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 1.1e-28 130.2 121 54.5
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.0e-26 122.1 72 81.9
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.4e-23 113.2 115 53.9
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 4.4e-22 108.2 120 49.2
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 3.5e-19 98.6 71 67.6
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 7.3e-17 90.9 135 45.9
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.8e-15 86.3 45 88.9
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.2e-13 79.3 41 90.2
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.2e-13 79.3 41 90.2
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 8.4e-13 77.4 54 68.5
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.1e-12 77.0 42 83.3
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 1.9e-12 76.3 114 41.2
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 1.6e-11 73.2 37 89.2
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.5e-06 56.6 42 57.1
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 4.5e-06 55.1 36 69.4


User provided reference genes

Program Settings